RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 LOC105369274A0A096LPK9 316 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 LOC102723532A0A0G2JNH3 316 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 XPNPEP2O43895 674 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 CYP3A4P08684 503 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 SRGAP2BP0DMP2 458 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 UNGP13051 313 aaPredicted RBP3.51□□□□□ -1.85
SMC4-220ENST00000488017 DGKAP23743 735 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 ATP12AP54707 1039 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 SEMA5AQ13591 1074 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 PTPROQ16827 1216 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 PLK5Q496M5 336 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 PLEKHO1Q53GL0 409 aaPredicted RBP3.51□□□□□ -1.85
SMC4-220ENST00000488017 ARL13AQ5H913 290 aaPredicted RBP3.51□□□□□ -1.85
SMC4-220ENST00000488017 BEND5Q7L4P6 421 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 TRMT1LQ7Z2T5 733 aaKnown RBP3.51□□□□□ -1.85
SMC4-220ENST00000488017 OR4N4Q8N0Y3 316 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 HORMAD2Q8N7B1 307 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 ANKRD44Q8N8A2 993 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 MIGA1Q8NAN2 632 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 CD101Q93033 1021 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 FRMD8Q9BZ67 464 aaPredicted RBP3.51□□□□□ -1.85
SMC4-220ENST00000488017 NUP62CLQ9H1M0 184 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 MALT1Q9UDY8 824 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 SLC45A1Q9Y2W3 748 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 SNX13Q9Y5W8 968 aa3.51□□□□□ -1.85
SMC4-220ENST00000488017 A0A0U1RQJ8 604 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 FAM172BPA6NC97 362 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 EYA2O00167 538 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 CLGNO14967 610 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 ITM2AO43736 263 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 ENO3P13929 434 aaPredicted RBP3.5□□□□□ -1.85
SMC4-220ENST00000488017 FGFR2P21802 821 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 IBSPP21815 317 aaPredicted RBP3.5□□□□□ -1.85
SMC4-220ENST00000488017 GABRB3P28472 473 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 CDH12P55289 794 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 TMPRSS3P57727 454 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 FOXL2P58012 376 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 PHEXP78562 749 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 DLG1Q12959 904 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 RBBP5Q15291 538 aaKnown RBP3.5□□□□□ -1.85
SMC4-220ENST00000488017 C14orf177Q52M58 125 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 FAM102BQ5T8I3 360 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 GDPD4Q6W3E5 623 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 RASGRP3Q8IV61 690 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 KLHDC8BQ8IXV7 354 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 TMEM217Q8N7C4 229 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 ZNF114Q8NC26 417 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 CEP76Q8TAP6 659 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 SORCS1Q8WY21 1168 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 EVA1AQ9H8M9 152 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 FSCN3Q9NQT6 498 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 CA14Q9ULX7 337 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 NOP58Q9Y2X3 529 aaKnown RBP3.5□□□□□ -1.85
SMC4-220ENST00000488017 SMAD5-AS1Q9Y6J3 95 aa3.5□□□□□ -1.85
SMC4-220ENST00000488017 PNMA6EA0A0J9YXQ4 647 aa3.49□□□□□ -1.85
SMC4-220ENST00000488017 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.49□□□□□ -1.85
SMC4-220ENST00000488017 J3KTA2 159 aa3.49□□□□□ -1.85
SMC4-220ENST00000488017 TAF5LO75529 589 aa3.49□□□□□ -1.85
SMC4-220ENST00000488017 BAG4O95429 457 aaKnown RBP3.49□□□□□ -1.85
SMC4-220ENST00000488017 MYBPHQ13203 477 aa3.49□□□□□ -1.85
SMC4-220ENST00000488017 PKP1Q13835 747 aa3.49□□□□□ -1.85
SMC4-220ENST00000488017 MAPKAPK3Q16644 382 aa3.49□□□□□ -1.85
SMC4-220ENST00000488017 ZNF772Q68DY9 489 aaPredicted RBP3.49□□□□□ -1.85
SMC4-220ENST00000488017 ANKRD40Q6AI12 368 aa3.49□□□□□ -1.85
SMC4-220ENST00000488017 ZDHHC23Q8IYP9 409 aa3.49□□□□□ -1.85
SMC4-220ENST00000488017 IL17RCQ8NAC3 791 aa3.49□□□□□ -1.85
SMC4-220ENST00000488017 TRMT61BQ9BVS5 477 aaKnown RBP3.49□□□□□ -1.85
SMC4-220ENST00000488017 EIF2AQ9BY44 585 aaKnown RBP3.49□□□□□ -1.85
SMC4-220ENST00000488017 HIPK3Q9H422 1215 aa3.49□□□□□ -1.85
SMC4-220ENST00000488017 UBTD1Q9HAC8 227 aa3.49□□□□□ -1.85
SMC4-220ENST00000488017 SCRT2Q9NQ03 307 aa3.49□□□□□ -1.85
SMC4-220ENST00000488017 MYO1AQ9UBC5 1043 aa3.49□□□□□ -1.85
SMC4-220ENST00000488017 NFS1Q9Y697 457 aa3.49□□□□□ -1.85
SMC4-220ENST00000488017 TMCC1O94876 653 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 PDGFRBP09619 1106 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 ZNF883P0CG24 379 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 GRK5P34947 590 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 MXI1P50539 228 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 CYP2J2P51589 502 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 KRTAP10-8P60410 259 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 RPL15P61313 204 aaKnown RBP3.48□□□□□ -1.85
SMC4-220ENST00000488017 ZBTB16Q05516 673 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 ST3GAL1Q11201 340 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 ACCSLQ4AC99 568 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 BSPRYQ5W0U4 402 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 NXNQ6DKJ4 435 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 UNQ6126/PRO20091Q6UXV3 157 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 TUBA1AQ71U36 451 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 MARK2Q7KZI7 788 aaKnown RBP3.48□□□□□ -1.85
SMC4-220ENST00000488017 ANKS1BQ7Z6G8 1248 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 TEX45Q8NA69 505 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 SECTM1Q8WVN6 248 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 TXNDC15Q96J42 360 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 FEM1CQ96JP0 617 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 TUBA1CQ9BQE3 449 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 HELLSQ9NRZ9 838 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 DDX20Q9UHI6 824 aaKnown RBP3.48□□□□□ -1.85
SMC4-220ENST00000488017 NOB1Q9ULX3 412 aaKnown RBP3.48□□□□□ -1.85
SMC4-220ENST00000488017 TCF19Q9Y242 345 aa3.48□□□□□ -1.85
SMC4-220ENST00000488017 WDR81Q562E7 1941 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms