RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 SYCP3Q8IZU3 236 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 GPD1LQ8N335 351 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 Q8N9G6 341 aaPredicted RBP12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 TTC13Q8NBP0 860 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 FAM131CQ96AQ9 280 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 TMEM159Q96B96 161 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 ELMO3Q96BJ8 720 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 PLD4Q96BZ4 506 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 EPAS1Q99814 870 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 TCEAL2Q9H3H9 227 aaPredicted RBP12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 MAP4K5Q9Y4K4 846 aa12.57□□□□□ -0.4
ATPAF1-205ENST00000487193 SHANK1Q9Y566 2161 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 SPTY2D1-AS1A0A0U1RR47 76 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 GOLGA6L7A0A1B0GV03 622 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 POM121BA6NF01 834 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 SRPRAP08240 638 aaKnown RBP12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 CCL4P13236 92 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 UGT1A3P35503 534 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 KIF11P52732 1056 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 TAS2R38P59533 333 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 TRIP4Q15650 581 aaPredicted RBP12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 PRRT3Q5FWE3 981 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 ADGRF1Q5T601 910 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 PHF19Q5T6S3 580 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 RNF219Q5W0B1 726 aaPredicted RBP12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 SP5Q6BEB4 398 aaPredicted RBP12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 TCTN3Q6NUS6 607 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 C16orf46Q6P387 395 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 CCDC186Q7Z3E2 898 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 SFR1Q86XK3 245 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 CCDC13Q8IYE1 715 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 RBFAQ8N0V3 343 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 KCTD17Q8N5Z5 321 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 KDM1BQ8NB78 822 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 HVCN1Q96D96 273 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 LMLNQ96KR4 655 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 CDH19Q9H159 772 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 FOXP1Q9H334 677 aaPredicted RBP12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 MRPL44Q9H9J2 332 aaKnown RBP12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 MAP10Q9P2G4 905 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 SPASTQ9UBP0 616 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 KCND3Q9UK17 655 aa12.56□□□□□ -0.4
ATPAF1-205ENST00000487193 ZNF233A6NK53 670 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 MKRN2OSH3BPM6 223 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 YY2O15391 372 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 DLATP10515 647 aaKnown RBP12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 TNNI1P19237 187 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 STK19P49842 368 aaPredicted RBP12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 TOB1P50616 345 aaPredicted RBP12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 ECT2LQ008S8 904 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 ZFP36L1Q07352 338 aaKnown RBP12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 TRPC3Q13507 836 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 PDE1CQ14123 709 aaPredicted RBP12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 ELAVL3Q14576 367 aaKnown RBP12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 SURF1Q15526 300 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 PITRM1Q5JRX3 1037 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 L1TD1Q5T7N2 865 aaKnown RBP12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 FAM46CQ5VWP2 391 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 SKAP1Q86WV1 359 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 HORMAD1Q86X24 394 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 CBWD2Q8IUF1 395 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 WDR49Q8IV35 697 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 CARNMT1Q8N4J0 409 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 FIBINQ8TAL6 211 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 PMEPA1Q969W9 287 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 SLC45A3Q96JT2 553 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 C5orf34Q96MH7 638 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 SDCBP2Q9H190 292 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 UNC13CQ8NB66 2214 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 ITIH6Q6UXX5 1313 aa12.55□□□□□ -0.4
ATPAF1-205ENST00000487193 HIVEP3Q5T1R4 2406 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 PPP1R37O75864 691 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 PCDH8O95206 1070 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 ZNF18P17022 549 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 ITGB7P26010 798 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 PRPHP41219 470 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 ARSDP51689 593 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 ZNF445P59923 1031 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 FSCBQ5H9T9 825 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 TPRG1LQ5T0D9 272 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 PIK3R6Q5UE93 754 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 KYQ8NBH2 561 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 BTN2A2Q8WVV5 523 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 SPAG5Q96R06 1193 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 STRA6Q9BX79 667 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 TM6SF1Q9BZW5 370 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 GPN2Q9H9Y4 310 aaPredicted RBP12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 SFMBT1Q9UHJ3 866 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 ZFR2Q9UPR6 939 aaKnown RBP12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 HS3ST3A1Q9Y663 406 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 RNF215Q9Y6U7 377 aa12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 ZNF106Q9H2Y7 1883 aaKnown RBP12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 TNRC6AQ8NDV7 1962 aaKnown RBP12.54□□□□□ -0.4
ATPAF1-205ENST00000487193 CAPN5O15484 640 aaPredicted RBP12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 SPINT1O43278 529 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 GCNT3O95395 438 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 SLFN14P0C7P3 912 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 EIF2B5Q13144 721 aaKnown RBP12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 C16orf72Q14CZ0 275 aa12.53□□□□□ -0.4
ATPAF1-205ENST00000487193 TCEA2Q15560 299 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms