RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 DAB2IPQ5VWQ8 1189 aa13.48□□□□□ -0.25
SF1-216ENST00000486867 AFMIDQ63HM1 303 aa13.48□□□□□ -0.25
SF1-216ENST00000486867 PMS2CLQ68D20 193 aa13.48□□□□□ -0.25
SF1-216ENST00000486867 TXNRD3NBQ6F5E7 133 aa13.48□□□□□ -0.25
SF1-216ENST00000486867 RWDD4Q6NW29 188 aaKnown RBP13.48□□□□□ -0.25
SF1-216ENST00000486867 KBTBD6Q86V97 674 aa13.48□□□□□ -0.25
SF1-216ENST00000486867 TMPRSS6Q8IU80 811 aa13.48□□□□□ -0.25
SF1-216ENST00000486867 FAM160A2Q8N612 972 aaPredicted RBP13.48□□□□□ -0.25
SF1-216ENST00000486867 OR7D4Q8NG98 312 aa13.48□□□□□ -0.25
SF1-216ENST00000486867 SLC35G2Q8TBE7 412 aa13.48□□□□□ -0.25
SF1-216ENST00000486867 RPL10LQ96L21 214 aaKnown RBP13.48□□□□□ -0.25
SF1-216ENST00000486867 FAM129BQ96TA1 746 aa13.48□□□□□ -0.25
SF1-216ENST00000486867 DUSP15Q9H1R2 295 aaPredicted RBP13.48□□□□□ -0.25
SF1-216ENST00000486867 DHX35Q9H5Z1 703 aaKnown RBP13.48□□□□□ -0.25
SF1-216ENST00000486867 CATSPERBQ9H7T0 1116 aa13.48□□□□□ -0.25
SF1-216ENST00000486867 PRDM16Q9HAZ2 1276 aa13.48□□□□□ -0.25
SF1-216ENST00000486867 OSGEPQ9NPF4 335 aa13.48□□□□□ -0.25
SF1-216ENST00000486867 ITM2CQ9NQX7 267 aa13.48□□□□□ -0.25
SF1-216ENST00000486867 GPATCH2LQ9NWQ4 482 aa13.48□□□□□ -0.25
SF1-216ENST00000486867 CTTNBP2NLQ9P2B4 639 aa13.48□□□□□ -0.25
SF1-216ENST00000486867 MBD1Q9UIS9 605 aaPredicted RBP13.48□□□□□ -0.25
SF1-216ENST00000486867 SLC25A13Q9UJS0 675 aa13.48□□□□□ -0.25
SF1-216ENST00000486867 CEP250Q9BV73 2442 aa13.48□□□□□ -0.25
SF1-216ENST00000486867 LAMA1P25391 3075 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 A0A0A6YYK5 440 aaPredicted RBP13.47□□□□□ -0.25
SF1-216ENST00000486867 IGHV1OR15-9A0A0B4J2B8 117 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 ALOX15BO15296 676 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 ZBTB24O43167 697 aaPredicted RBP13.47□□□□□ -0.25
SF1-216ENST00000486867 SNAP91O60641 907 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 LRP3O75074 770 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 SIN3BO75182 1162 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 MT-CO1P00395 513 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 RARAP10276 462 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 SRCP12931 536 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 BCKDHBP21953 392 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 CYLC1P35663 651 aaPredicted RBP13.47□□□□□ -0.25
SF1-216ENST00000486867 NNMTP40261 264 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 NDST2P52849 883 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 TPI1P60174 286 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 RPS14P62263 151 aaKnown RBP13.47□□□□□ -0.25
SF1-216ENST00000486867 ARF5P84085 180 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 PARP15Q460N3 678 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 RFX8Q6ZV50 586 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 POLNQ7Z5Q5 900 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 PLPP6Q8IY26 295 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 ZNF366Q8N895 744 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 FAM131CQ96AQ9 280 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 ISG20Q96AZ6 181 aaKnown RBP13.47□□□□□ -0.25
SF1-216ENST00000486867 SIPA1Q96FS4 1042 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 SLC6A17Q9H1V8 727 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 LRRC19Q9H756 370 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 CWC15Q9P013 229 aaKnown RBP13.47□□□□□ -0.25
SF1-216ENST00000486867 BCCIPQ9P287 314 aaKnown RBP eCLIP13.47□□□□□ -0.25
SF1-216ENST00000486867 RCOR3Q9P2K3 495 aaPredicted RBP13.47□□□□□ -0.25
SF1-216ENST00000486867 SCML1Q9UN30 329 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 EPN1Q9Y6I3 576 aaPredicted RBP13.47□□□□□ -0.25
SF1-216ENST00000486867 CFAP54Q96N23 3096 aa13.47□□□□□ -0.25
SF1-216ENST00000486867 DMXL1Q9Y485 3027 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 EEF2KO00418 725 aaKnown RBP13.46□□□□□ -0.25
SF1-216ENST00000486867 DCLK1O15075 740 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 CREB3O43889 395 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 GFRA3O60609 400 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 RAMP2O60895 175 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 ZNF821O75541 412 aaPredicted RBP13.46□□□□□ -0.25
SF1-216ENST00000486867 EPN2O95208 641 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 NDUFA10O95299 355 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 RETP07949 1114 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 TGM1P22735 817 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 GLDCP23378 1020 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 ACVRL1P37023 503 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 SERPINH1P50454 418 aaKnown RBP13.46□□□□□ -0.25
SF1-216ENST00000486867 TPMTP51580 245 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 SERINC3Q13530 473 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 ELAVL3Q14576 367 aaKnown RBP13.46□□□□□ -0.25
SF1-216ENST00000486867 POLD3Q15054 466 aaPredicted RBP13.46□□□□□ -0.25
SF1-216ENST00000486867 DLG2Q15700 870 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 ZNF776Q68DI1 518 aaPredicted RBP13.46□□□□□ -0.25
SF1-216ENST00000486867 RETSATQ6NUM9 610 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 SLC36A4Q6YBV0 504 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 RLN3Q8WXF3 142 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 RUBCNQ92622 972 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 PRCCQ92733 491 aaPredicted RBP13.46□□□□□ -0.25
SF1-216ENST00000486867 SPACA7Q96KW9 195 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 CEP44Q9C0F1 390 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 MTG2Q9H4K7 406 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 PCDH18Q9HCL0 1135 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 ATP13A1Q9HD20 1204 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 DNAI1Q9UI46 699 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 REXO2Q9Y3B8 237 aaKnown RBP13.46□□□□□ -0.25
SF1-216ENST00000486867 PCDHGA5Q9Y5G8 931 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 PCDHA13Q9Y5I0 950 aa13.46□□□□□ -0.25
SF1-216ENST00000486867 SPTBN4Q9H254 2564 aa13.46□□□□□ -0.26
SF1-216ENST00000486867 TRPM6Q9BX84 2022 aa13.46□□□□□ -0.26
SF1-216ENST00000486867 PCDH15Q96QU1 1955 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 PLXNA2O75051 1894 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 ZSCAN5CA6NGD5 496 aaPredicted RBP13.45□□□□□ -0.26
SF1-216ENST00000486867 SOWAHDA6NJG2 315 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 BTNL10A8MVZ5 291 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 ZNF487B1APH4 448 aa13.45□□□□□ -0.26
SF1-216ENST00000486867 MCF2LO15068 1137 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms