RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 GRIK2Q13002 908 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 TEAD4Q15561 434 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 TDRD12Q587J7 1177 aaKnown RBP13.21□□□□□ -0.29
CHMP3-208ENST00000486404 SH3PXD2AQ5TCZ1 1133 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 FAM46CQ5VWP2 391 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 PSAPL1Q6NUJ1 521 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 WDR59Q6PJI9 974 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 ZNF783Q6ZMS7 281 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 MCOLN2Q8IZK6 566 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 SH2D3CQ8N5H7 860 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 MINDY1Q8N5J2 469 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 CCDC185Q8N715 623 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 DNASE2BQ8WZ79 361 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 PTPRN2Q92932 1015 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 TBC1D31Q96DN5 1066 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 NAP1L5Q96NT1 182 aaPredicted RBP13.21□□□□□ -0.29
CHMP3-208ENST00000486404 SPON2Q9BUD6 331 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 HAUS4Q9H6D7 363 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 PPARGC1AQ9UBK2 798 aaKnown RBP13.21□□□□□ -0.29
CHMP3-208ENST00000486404 OR12D3Q9UGF7 316 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.21□□□□□ -0.29
CHMP3-208ENST00000486404 NCOR2Q9Y618 2525 aa13.21□□□□□ -0.29
CHMP3-208ENST00000486404 ILVBLA1L0T0 632 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 CDX4O14627 284 aaPredicted RBP13.2□□□□□ -0.3
CHMP3-208ENST00000486404 ALOX15BO15296 676 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 ATMINO43313 823 aaPredicted RBP13.2□□□□□ -0.3
CHMP3-208ENST00000486404 ATP9BO43861 1147 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 SNAP91O60641 907 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 CLCN6P51797 869 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 AFF3P51826 1226 aaKnown RBP13.2□□□□□ -0.3
CHMP3-208ENST00000486404 ZNF143P52747 638 aaPredicted RBP13.2□□□□□ -0.3
CHMP3-208ENST00000486404 HDAC4P56524 1084 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 UBASH3AP57075 661 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 DLG2Q15700 870 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 RAB6CQ53S08 254 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 KIAA0895LQ68EN5 471 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 RETSATQ6NUM9 610 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 SCYL2Q6P3W7 929 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 LINGO4Q6UY18 593 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 IRF2BP2Q7Z5L9 587 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 ADAT2Q7Z6V5 191 aaKnown RBP13.2□□□□□ -0.3
CHMP3-208ENST00000486404 SLFN11Q7Z7L1 901 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 VPS36Q86VN1 386 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 ZNF354CQ86Y25 554 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 OR7D4Q8NG98 312 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 NTAN1Q96AB6 310 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 ZNF653Q96CK0 615 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 ALG14Q96F25 216 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 TRIM11Q96F44 468 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 PSMB7Q99436 277 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 EDEM3Q9BZQ6 932 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 ZDHHC5Q9C0B5 715 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 RAB6CQ9H0N0 254 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 SLC32A1Q9H598 525 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 SERGEFQ9UGK8 458 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 HS3ST2Q9Y278 367 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 OR51B4Q9Y5P0 310 aa13.2□□□□□ -0.3
CHMP3-208ENST00000486404 A0A0D9SEW6 157 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 KCNK5O95279 499 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 CER1O95813 267 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 PLEKP08567 350 aaPredicted RBP13.19□□□□□ -0.3
CHMP3-208ENST00000486404 C7P10643 843 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 SRCP12931 536 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 RHOQP17081 205 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 GOT1P17174 413 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 PSMA2P25787 234 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 CD27P26842 260 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 MAPKAPK2P49137 400 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 ADPRHP54922 357 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 RPL7AP62424 266 aaKnown RBP13.19□□□□□ -0.3
CHMP3-208ENST00000486404 NRG1Q02297 640 aaPredicted RBP13.19□□□□□ -0.3
CHMP3-208ENST00000486404 GNA12Q03113 381 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 SCAPQ12770 1279 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 POM121L1PQ3SYA9 428 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 FIGNQ5HY92 759 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 C22orf39Q6P5X5 142 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 NCEH1Q6PIU2 408 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 IL27RAQ6UWB1 636 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 TMC6Q7Z403 805 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 AADATQ8N5Z0 425 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 OR2I1PQ8NGU4 316 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 OR2T34Q8NGX1 318 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 OR14C36Q8NHC7 312 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 FRS2Q8WU20 508 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 CENPIQ92674 756 aaPredicted RBP13.19□□□□□ -0.3
CHMP3-208ENST00000486404 BIRC7Q96CA5 298 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 IQCDQ96DY2 449 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 VCPIP1Q96JH7 1222 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 EPAS1Q99814 870 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 CNPY3Q9BT09 278 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 TTYH3Q9C0H2 523 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 OSBPL2Q9H1P3 480 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 DYRK4Q9NR20 520 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 PARVAQ9NVD7 372 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 TAS2R14Q9NYV8 317 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 AIPL1Q9NZN9 384 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 ADAMTS1Q9UHI8 967 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 HPCAL4Q9UM19 191 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 SCINQ9Y6U3 715 aa13.19□□□□□ -0.3
CHMP3-208ENST00000486404 A0A1W2PQJ5 194 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms