RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 MAGEA12P43365 314 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 RENBPP51606 427 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 CSE1LP55060 971 aaKnown RBP12.2□□□□□ -0.46
PKP4-213ENST00000486254 SESN2P58004 480 aaPredicted RBP12.2□□□□□ -0.46
PKP4-213ENST00000486254 TLE2Q04725 743 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 MPP3Q13368 585 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 BTG3Q14201 252 aaPredicted RBP12.2□□□□□ -0.46
PKP4-213ENST00000486254 SLC14A2Q15849 920 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 PSMD5Q16401 504 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 INSCQ1MX18 579 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 GRTP1Q5TC63 336 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 RSPO2Q6UXX9 243 aaPredicted RBP12.2□□□□□ -0.46
PKP4-213ENST00000486254 PACS1Q6VY07 963 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 TRPM8Q7Z2W7 1104 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 TMEM173Q86WV6 379 aaPredicted RBP12.2□□□□□ -0.46
PKP4-213ENST00000486254 TEX26Q8N6G2 289 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 OR52K1Q8NGK4 314 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 BCL7CQ8WUZ0 217 aaPredicted RBP12.2□□□□□ -0.46
PKP4-213ENST00000486254 PPM1EQ8WY54 764 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 ZNF75CPQ92670 426 aaPredicted RBP12.2□□□□□ -0.46
PKP4-213ENST00000486254 MRRFQ96E11 262 aaKnown RBP12.2□□□□□ -0.46
PKP4-213ENST00000486254 PGLYRP2Q96PD5 576 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 BEGAINQ9BUH8 593 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 HERC2P3Q9BVR0 1158 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 CEP41Q9BYV8 373 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 SLC39A8Q9C0K1 460 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 MLXIPLQ9NP71 852 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 ZFATQ9P243 1243 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 KLHL14Q9P2G3 628 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 GRID1Q9ULK0 1009 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 RPS6KL1Q9Y6S9 549 aa12.2□□□□□ -0.46
PKP4-213ENST00000486254 DFFAO00273 331 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 TLR5O60602 858 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 PEX11BO96011 259 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 DNAJB1P25685 340 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 DSG1Q02413 1049 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 CDK18Q07002 472 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 EFEMP1Q12805 493 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 ANKRD20A4Q4UJ75 823 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 C10orf120Q5SQS8 335 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 SDHAF4Q5VUM1 108 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 CGB2Q6NT52 195 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 LCA5Q86VQ0 697 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 CNTN4Q8IWV2 1026 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 CMTR2Q8IYT2 770 aaKnown RBP12.19□□□□□ -0.46
PKP4-213ENST00000486254 DNAAF3Q8N9W5 541 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 ZNF784Q8NCA9 323 aaPredicted RBP12.19□□□□□ -0.46
PKP4-213ENST00000486254 ATP2A3Q93084 1043 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 ZNF689Q96CS4 500 aaPredicted RBP12.19□□□□□ -0.46
PKP4-213ENST00000486254 SCLYQ96I15 445 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 CELF6Q96J87 481 aaKnown RBP12.19□□□□□ -0.46
PKP4-213ENST00000486254 ZNF599Q96NL3 588 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 SEPT5Q99719 369 aaPredicted RBP12.19□□□□□ -0.46
PKP4-213ENST00000486254 PRKD2Q9BZL6 878 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 SLC25A51Q9H1U9 297 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 CRISPLD1Q9H336 500 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 NOL6Q9H6R4 1146 aaKnown RBP12.19□□□□□ -0.46
PKP4-213ENST00000486254 IPO11Q9UI26 975 aaKnown RBP12.19□□□□□ -0.46
PKP4-213ENST00000486254 PHTF1Q9UMS5 762 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 SLC12A4Q9UP95 1085 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 CDY1Q9Y6F8 540 aa12.19□□□□□ -0.46
PKP4-213ENST00000486254 GLRA3O75311 464 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 SKIV2L2P42285 1042 aaKnown RBP12.18□□□□□ -0.46
PKP4-213ENST00000486254 SERPINB4P48594 390 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 POLD2P49005 469 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 PAPOLAP51003 745 aaKnown RBP12.18□□□□□ -0.46
PKP4-213ENST00000486254 LIMK2P53671 638 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 ACTN3Q08043 901 aaPredicted RBP12.18□□□□□ -0.46
PKP4-213ENST00000486254 DUSP4Q13115 394 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 TRIM60Q495X7 471 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 PCID2Q5JVF3 399 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 RASIP1Q5U651 963 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 PDPK2PQ6A1A2 396 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 C14orf80Q86SX3 495 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 ZNF461Q8TAF7 563 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 TOP1MTQ969P6 601 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 TADA1Q96BN2 335 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 PLD4Q96BZ4 506 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 TBL1YQ9BQ87 522 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 MCMBPQ9BTE3 642 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 MANSC1Q9H8J5 431 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 RXFP1Q9HBX9 757 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 SIRPGQ9P1W8 387 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 TXNDC16Q9P2K2 825 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 DNMT3LQ9UJW3 386 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 TIMM44O43615 452 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 SIN3BO75182 1162 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 PIAS1O75925 651 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 LATS1O95835 1130 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 MOCS2O96007 188 aaPredicted RBP12.18□□□□□ -0.46
PKP4-213ENST00000486254 HLA-DQB2P05538 268 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 ITGA2BP08514 1039 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 TROVE2P10155 538 aaKnown RBP eCLIP12.18□□□□□ -0.46
PKP4-213ENST00000486254 LAG3P18627 525 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 ALDH3A1P30838 453 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 SPRP35270 261 aaPredicted RBP12.18□□□□□ -0.46
PKP4-213ENST00000486254 CCL23P55773 120 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 CREMQ03060 361 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 PPARDQ03181 441 aa12.18□□□□□ -0.46
PKP4-213ENST00000486254 IL10RBQ08334 325 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms