RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 NETO2Q8NC67 525 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 HJURPQ8NCD3 748 aaPredicted RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 RNF214Q8ND24 703 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 WFIKKN2Q8TEU8 576 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 IPO4Q8TEX9 1081 aaKnown RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 FNIP1Q8TF40 1166 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 GAB3Q8WWW8 586 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 ATRIPQ8WXE1 791 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 GOLGA1Q92805 767 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 NKD2Q969F2 451 aaPredicted RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 NTAN1Q96AB6 310 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 FAM149B1Q96BN6 582 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 ARHGEF26Q96DR7 871 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 DNAJC7Q99615 494 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 PACSIN1Q9BY11 444 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 TPSD1Q9BZJ3 242 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 XPO4Q9C0E2 1151 aaKnown RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 OSBPL2Q9H1P3 480 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 DUSP15Q9H1R2 295 aaPredicted RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 HAUS4Q9H6D7 363 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 NOL6Q9H6R4 1146 aaKnown RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 DDIT4Q9NX09 232 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 CACNA2D2Q9NY47 1150 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.9□□□□□ -1.46
CUX1-208ENST00000485792 ARHGAP20Q9P2F6 1191 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 PPARGC1AQ9UBK2 798 aaKnown RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 SERGEFQ9UGK8 458 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 TFR2Q9UP52 801 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 CEP83Q9Y592 693 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 HS3ST4Q9Y661 456 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 BZW2Q9Y6E2 419 aaKnown RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 FRYQ5TBA9 3013 aa5.9□□□□□ -1.47
CUX1-208ENST00000485792 ASXL3Q9C0F0 2248 aa5.9□□□□□ -1.47
CUX1-208ENST00000485792 CELSR3Q9NYQ7 3312 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 PIKFYVEQ9Y2I7 2098 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 A0A1B0GVM2 712 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 TCAF2A6NFQ2 919 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 TMEM191CA6NGB0 347 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 H3BM21 787 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 M0QYT0 321 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 CAPN9O14815 690 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 CCP110O43303 1012 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 RTN2O75298 545 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 PAGE1O75459 146 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 ZNF821O75541 412 aaPredicted RBP5.89□□□□□ -1.47
CUX1-208ENST00000485792 LUC7L3O95232 432 aaKnown RBP5.89□□□□□ -1.47
CUX1-208ENST00000485792 KLF8O95600 359 aaPredicted RBP5.89□□□□□ -1.47
CUX1-208ENST00000485792 APBB3O95704 486 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 MOCS2O96007 188 aaPredicted RBP5.89□□□□□ -1.47
CUX1-208ENST00000485792 CYBBP04839 570 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 CALB1P05937 261 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 DLDP09622 509 aaKnown RBP5.89□□□□□ -1.47
CUX1-208ENST00000485792 PABPC1P11940 636 aaKnown RBP5.89□□□□□ -1.47
CUX1-208ENST00000485792 HLA-EP13747 358 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 RRM1P23921 792 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 MZF1P28698 734 aaPredicted RBP5.89□□□□□ -1.47
CUX1-208ENST00000485792 GBP1P32455 592 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 ADRA1BP35368 520 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 STK19P49842 368 aaPredicted RBP5.89□□□□□ -1.47
CUX1-208ENST00000485792 ZNF143P52747 638 aaPredicted RBP5.89□□□□□ -1.47
CUX1-208ENST00000485792 POU4F2Q12837 409 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 MAMLD1Q13495 774 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 AUHQ13825 339 aaKnown RBP5.89□□□□□ -1.47
CUX1-208ENST00000485792 ZNF234Q14588 700 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 E2F5Q15329 346 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 CCDC6Q16204 474 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 OCLNQ16625 522 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 PLEKHG6Q3KR16 790 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 PLK5Q496M5 336 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 C4orf17Q53FE4 359 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 C10orf76Q5T2E6 689 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 FAM102AQ5T9C2 384 aaPredicted RBP5.89□□□□□ -1.47
CUX1-208ENST00000485792 TTC39BQ5VTQ0 682 aaPredicted RBP5.89□□□□□ -1.47
CUX1-208ENST00000485792 HEATR6Q6AI08 1181 aaKnown RBP5.89□□□□□ -1.47
CUX1-208ENST00000485792 LAIR1Q6GTX8 287 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 TCEAL6Q6IPX3 200 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 KDM7AQ6ZMT4 941 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 CHST9Q7L1S5 443 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 NLRP14Q86W24 1093 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 VSTM4Q8IW00 320 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 AHI1Q8N157 1196 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 CCAR2Q8N163 923 aaKnown RBP5.89□□□□□ -1.47
CUX1-208ENST00000485792 ATP6V0D2Q8N8Y2 350 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 DDI1Q8WTU0 396 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 FRS2Q8WU20 508 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 CYB5D2Q8WUJ1 264 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 SCG3Q8WXD2 468 aaKnown RBP5.89□□□□□ -1.47
CUX1-208ENST00000485792 RLN3Q8WXF3 142 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 TCEAL3Q969E4 200 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 DDX50Q9BQ39 737 aaKnown RBP5.89□□□□□ -1.47
CUX1-208ENST00000485792 ORAI3Q9BRQ5 295 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 FEM1AQ9BSK4 669 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 MKRN2Q9H000 416 aaKnown RBP5.89□□□□□ -1.47
CUX1-208ENST00000485792 KLC2Q9H0B6 622 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 WDCPQ9H6R7 721 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 FSCN3Q9NQT6 498 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 ADAM22Q9P0K1 906 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 IFNKQ9P0W0 207 aa5.89□□□□□ -1.47
CUX1-208ENST00000485792 USP36Q9P275 1121 aaKnown RBP5.89□□□□□ -1.47
CUX1-208ENST00000485792 GGA2Q9UJY4 613 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms