RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	ABCD1	P33897	745 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	TBCE	Q15813	527 aa	Predicted RBP	4.4	□□□□□ -1.71
FN1-222	ENST00000485567	MEA1	Q16626	185 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	C10orf76	Q5T2E6	689 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	UBAP2	Q5T6F2	1119 aa	Known RBP	4.4	□□□□□ -1.71
FN1-222	ENST00000485567	CRIP3	Q6Q6R5	217 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	C16orf54	Q6UWD8	224 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	DHRS13	Q6UX07	377 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	C17orf99	Q6UX52	265 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	RRM2B	Q7LG56	351 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	TFAP2D	Q7Z6R9	452 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	KLB	Q86Z14	1044 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	AMER2	Q8N7J2	671 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	C11orf65	Q8NCR3	313 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	BCAS4	Q8TDM0	211 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	ZFPM2	Q8WW38	1151 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	HSPH1	Q92598	858 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	SARAF	Q96BY9	339 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	KIF1BP	Q96EK5	621 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	ADAD1	Q96M93	576 aa	Known RBP	4.4	□□□□□ -1.71
FN1-222	ENST00000485567	KRTAP4-12	Q9BQ66	201 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	SDF4	Q9BRK5	362 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	DUSP26	Q9BV47	211 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	KRTAP9-2	Q9BYQ4	174 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
FN1-222	ENST00000485567	RANBP17	Q9H2T7	1088 aa	Known RBP	4.4	□□□□□ -1.71
FN1-222	ENST00000485567	CPNE5	Q9HCH3	593 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567		Q9N2J8	555 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	CLIC5	Q9NZA1	410 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	SH3BP4	Q9P0V3	963 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	FBXO40	Q9UH90	709 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	TNFSF13B	Q9Y275	285 aa		4.4	□□□□□ -1.71
FN1-222	ENST00000485567	OR6C68	A6NDL8	312 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.39	□□□□□ -1.71
FN1-222	ENST00000485567	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.39	□□□□□ -1.71
FN1-222	ENST00000485567	CCER2	I3L3R5	266 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	RRH	O14718	337 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	STRN	O43815	780 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	INSRR	P14616	1297 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	ALOX12	P18054	663 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	GPD1	P21695	349 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	TACR3	P29371	465 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	BSG	P35613	385 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	ARL3	P36405	182 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	HARS2	P49590	506 aa	Known RBP	4.39	□□□□□ -1.71
FN1-222	ENST00000485567	RARS	P54136	660 aa	Known RBP	4.39	□□□□□ -1.71
FN1-222	ENST00000485567	EIF3B	P55884	814 aa	Known RBP	4.39	□□□□□ -1.71
FN1-222	ENST00000485567	RPS3A	P61247	264 aa	Known RBP	4.39	□□□□□ -1.71
FN1-222	ENST00000485567	RPL7A	P62424	266 aa	Known RBP	4.39	□□□□□ -1.71
FN1-222	ENST00000485567	EFNB1	P98172	346 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	ZBTB16	Q05516	673 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	CERKL	Q49MI3	558 aa	Predicted RBP	4.39	□□□□□ -1.71
FN1-222	ENST00000485567	SLC9B1	Q4ZJI4	515 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	AKNAD1	Q5T1N1	836 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	RNF144B	Q7Z419	303 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	PXK	Q7Z7A4	578 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.39	□□□□□ -1.71
FN1-222	ENST00000485567	CPXM2	Q8N436	756 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	SCAI	Q8N9R8	606 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	KCNG4	Q8TDN1	519 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	KAT2B	Q92831	832 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	RITA1	Q96K30	269 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	FRG2B	Q96QU4	278 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	MPHOSPH8	Q99549	860 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.39	□□□□□ -1.71
FN1-222	ENST00000485567	CCDC68	Q9H2F9	335 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	TTYH1	Q9H313	450 aa	Predicted RBP	4.39	□□□□□ -1.71
FN1-222	ENST00000485567	GHITM	Q9H3K2	345 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	MUC13	Q9H3R2	512 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.39	□□□□□ -1.71
FN1-222	ENST00000485567	IL1RAPL1	Q9NZN1	696 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	UPB1	Q9UBR1	384 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	SERGEF	Q9UGK8	458 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	TLK1	Q9UKI8	766 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	GPR34	Q9UPC5	381 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	DHDH	Q9UQ10	334 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	TTLL3	Q9Y4R7	772 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	WNT6	Q9Y6F9	365 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	PIAS3	Q9Y6X2	628 aa		4.39	□□□□□ -1.71
FN1-222	ENST00000485567	RSF1	Q96T23	1441 aa	Predicted RBP	4.38	□□□□□ -1.71
FN1-222	ENST00000485567	SEC14L2	O76054	403 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	SERPINC1	P01008	464 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	LCK	P06239	509 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	FCGR2A	P12318	317 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	HOXD13	P35453	343 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	RGS2	P41220	211 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	SKIV2L2	P42285	1042 aa	Known RBP	4.38	□□□□□ -1.71
FN1-222	ENST00000485567	CLK3	P49761	638 aa	Known RBP	4.38	□□□□□ -1.71
FN1-222	ENST00000485567	BLK	P51451	505 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	DCTN2	Q13561	401 aa	Known RBP	4.38	□□□□□ -1.71
FN1-222	ENST00000485567	RPE65	Q16518	533 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	AWAT1	Q58HT5	328 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	TMEM268	Q5VZI3	342 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	SUMO4	Q6EEV6	95 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	TMEM81	Q6P7N7	255 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	KLHL24	Q6TFL4	600 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	RBM44	Q6ZP01	1051 aa	Known RBP	4.38	□□□□□ -1.71
FN1-222	ENST00000485567	CCDC129	Q6ZRS4	1044 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	CHSY1	Q86X52	802 aa		4.38	□□□□□ -1.71
FN1-222	ENST00000485567	PLD5	Q8N7P1	536 aa		4.38	□□□□□ -1.71

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