RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	TUBGCP2	Q9BSJ2	902 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	NDST4	Q9H3R1	872 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	WDCP	Q9H6R7	721 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	FTSJ1	Q9UET6	329 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	ADAMTS1	Q9UHI8	967 aa		13.63	□□□□□ -0.23
UBA3-210	ENST00000485424	RP1	P56715	2156 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	TRABD2B	A6NFA1	517 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	VILL	O15195	856 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	CLDN11	O75508	207 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	ITGAV	P06756	1048 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	TPM2	P07951	284 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	CD38	P28907	300 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	SULT1E1	P49888	294 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	PLK1	P53350	603 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	ADPRH	P54922	357 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	KRT83	P78385	493 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	CENPC	Q03188	943 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	DEUP1	Q05D60	604 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	CYP4F3	Q08477	520 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	HSP90AA4P	Q58FG1	418 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	BRMS1L	Q5PSV4	323 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	OLFML1	Q6UWY5	402 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	DHRS13	Q6UX07	377 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	LRRC31	Q6UY01	552 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	SLC26A9	Q7LBE3	791 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	WDTC1	Q8N5D0	677 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	PDCD7	Q8N8D1	485 aa	Known RBP	13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	SERAC1	Q96JX3	654 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	FAM129B	Q96TA1	746 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	PRMT1	Q99873	361 aa	Known RBP	13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	EBF2	Q9HAK2	575 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	PLCB1	Q9NQ66	1216 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	GDF3	Q9NR23	364 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	HS3ST4	Q9Y661	456 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424	TENM4	Q6N022	2769 aa		13.62	□□□□□ -0.23
UBA3-210	ENST00000485424		A0A1B0GTQ1	180 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	C10orf142	B7Z368	130 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	FOXN3	O00409	490 aa	Predicted RBP	13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	YKT6	O15498	198 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	MAGEC1	O60732	1142 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	PAGE1	O75459	146 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	F9	P00740	461 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	WNT1	P04628	370 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	RHOC	P08134	193 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	PNMA6A	P0CW24	399 aa	Predicted RBP	13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	CLCN1	P35523	988 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	GGCX	P38435	758 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	ARRB1	P49407	418 aa	Predicted RBP	13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	CCR5	P51681	352 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	CDH4	P55283	916 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	CCDC15	Q0P6D6	951 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	KCNJ12	Q14500	433 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	DRAP1	Q14919	205 aa	Predicted RBP	13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	PTPN20	Q4JDL3	420 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	ERICH1	Q86X53	443 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	GATAD2A	Q86YP4	633 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	IRF2BP1	Q8IU81	584 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	AADAT	Q8N5Z0	425 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	ZNF397	Q8NF99	534 aa	Predicted RBP	13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	LRIG1	Q96JA1	1093 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	BBC3	Q96PG8	261 aa	Predicted RBP	13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	ELF4	Q99607	663 aa	Predicted RBP	13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	TKTL2	Q9H0I9	626 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	NUP62CL	Q9H1M0	184 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	KDM4C	Q9H3R0	1056 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	CLSTN2	Q9H4D0	955 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	SIX2	Q9NPC8	291 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	DYRK4	Q9NR20	520 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	TMEM51	Q9NW97	253 aa		13.61	□□□□□ -0.23
UBA3-210	ENST00000485424	CBX4	O00257	560 aa		13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	ALOX15B	O15296	676 aa		13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	SLC7A4	O43246	635 aa		13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	VAV1	P15498	845 aa		13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	ERCC5	P28715	1186 aa	Predicted RBP	13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	RECQL	P46063	649 aa	Predicted RBP	13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	SHB	Q15464	509 aa		13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	DLG2	Q15700	870 aa		13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	TAF3	Q5VWG9	929 aa		13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	CXorf57	Q6NSI4	855 aa	Known RBP	13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	OXR1	Q8N573	874 aa		13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	ATP11C	Q8NB49	1132 aa		13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	C18orf8	Q96DM3	657 aa		13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	FEM1A	Q9BSK4	669 aa		13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	C2orf49	Q9BVC5	232 aa	Predicted RBP	13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	ASH1L	Q9NR48	2969 aa	Known RBP	13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	LRP4	O75096	1905 aa		13.6	□□□□□ -0.23
UBA3-210	ENST00000485424	COL6A6	A6NMZ7	2263 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424		A0A087WV48	116 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424		A0A1W2PR77	199 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424	WNT9A	O14904	365 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424	ATP9B	O43861	1147 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424	LDOC1	O95751	146 aa	Predicted RBP	13.59	□□□□□ -0.23
UBA3-210	ENST00000485424	CYP11B1	P15538	503 aa		13.59	□□□□□ -0.23
UBA3-210	ENST00000485424	MAT2A	P31153	395 aa	Known RBP	13.59	□□□□□ -0.23
UBA3-210	ENST00000485424	NUDT1	P36639	197 aa		13.59	□□□□□ -0.23

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