RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 DENND1BQ6P3S1 775 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 TRIM59Q8IWR1 403 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 SLC25A45Q8N413 288 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 SLC2A13Q96QE2 648 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 KLHL11Q9NVR0 708 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 ASNSD1Q9NWL6 643 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 HS3ST2Q9Y278 367 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 TBC1D30Q9Y2I9 924 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 RAI2Q9Y5P3 530 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 CFAP46Q8IYW2 2715 aa13.39□□□□□ -0.27
HDAC6-227ENST00000485102 TDRD6O60522 2096 aaKnown RBP13.38□□□□□ -0.27
HDAC6-227ENST00000485102 E5RJQ4 531 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 TRIM38O00635 465 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 SIGLEC6O43699 453 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 BRINP1O60477 761 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 GNA14O95837 355 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 METAP1P53582 386 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 TAS2R38P59533 333 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 PITX1P78337 314 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-227ENST00000485102 CDK17Q00537 523 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 CCDC15Q0P6D6 951 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 DLG2Q15700 870 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 CCDC40Q4G0X9 1142 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 ENOSF1Q7L5Y1 443 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 GPR155Q7Z3F1 870 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 SH2D3CQ8N5H7 860 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 OR4C6Q8NH72 309 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 FAM174AQ8TBP5 190 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 IFT43Q96FT9 208 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 KLHDC7BQ96G42 594 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 FAM81BQ96LP2 452 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 GDPD2Q9HCC8 539 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 SLC25A13Q9UJS0 675 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 TRPM6Q9BX84 2022 aa13.38□□□□□ -0.27
HDAC6-227ENST00000485102 CAPN8A6NHC0 703 aa13.37□□□□□ -0.27
HDAC6-227ENST00000485102 LZTS3O60299 673 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-227ENST00000485102 CLDN11O75508 207 aa13.37□□□□□ -0.27
HDAC6-227ENST00000485102 DXOO77932 396 aaKnown RBP13.37□□□□□ -0.27
HDAC6-227ENST00000485102 GIMD1P0DJR0 217 aa13.37□□□□□ -0.27
HDAC6-227ENST00000485102 CD44P16070 742 aaKnown RBP13.37□□□□□ -0.27
HDAC6-227ENST00000485102 DGKAP23743 735 aa13.37□□□□□ -0.27
HDAC6-227ENST00000485102 MAT2AP31153 395 aaKnown RBP13.37□□□□□ -0.27
HDAC6-227ENST00000485102 TLE3Q04726 772 aa13.37□□□□□ -0.27
HDAC6-227ENST00000485102 PDCLQ13371 301 aa13.37□□□□□ -0.27
HDAC6-227ENST00000485102 AUHQ13825 339 aaKnown RBP13.37□□□□□ -0.27
HDAC6-227ENST00000485102 TAF5Q15542 800 aa13.37□□□□□ -0.27
HDAC6-227ENST00000485102 EFHC1Q5JVL4 640 aa13.37□□□□□ -0.27
HDAC6-227ENST00000485102 PIP5KL1Q5T9C9 394 aa13.37□□□□□ -0.27
HDAC6-227ENST00000485102 CDCP2Q5VXM1 449 aa13.37□□□□□ -0.27
HDAC6-227ENST00000485102 ERICH1Q86X53 443 aa13.37□□□□□ -0.27
HDAC6-227ENST00000485102 LSMEM2Q8N112 164 aa13.37□□□□□ -0.27
HDAC6-227ENST00000485102 TMIEQ8NEW7 156 aa13.37□□□□□ -0.27
HDAC6-227ENST00000485102 OR52K2Q8NGK3 314 aa13.37□□□□□ -0.27
HDAC6-227ENST00000485102 WBP1Q96G27 269 aa13.37□□□□□ -0.27
HDAC6-227ENST00000485102 FCRL3Q96P31 734 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-227ENST00000485102 TMEM51Q9NW97 253 aa13.37□□□□□ -0.27
HDAC6-227ENST00000485102 DDIT4Q9NX09 232 aa13.37□□□□□ -0.27
HDAC6-227ENST00000485102 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-227ENST00000485102 BICDL2A1A5D9 508 aa13.36□□□□□ -0.27
HDAC6-227ENST00000485102 PPP1R3GB7ZBB8 358 aa13.36□□□□□ -0.27
HDAC6-227ENST00000485102 RIOK3O14730 519 aaKnown RBP13.36□□□□□ -0.27
HDAC6-227ENST00000485102 HSF2BPO75031 334 aa13.36□□□□□ -0.27
HDAC6-227ENST00000485102 LETM1O95202 739 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-227ENST00000485102 MT-CO3P00414 261 aa13.36□□□□□ -0.27
HDAC6-227ENST00000485102 GP1BAP07359 652 aa13.36□□□□□ -0.27
HDAC6-227ENST00000485102 CKMT1AP12532 417 aa13.36□□□□□ -0.27
HDAC6-227ENST00000485102 CDH4P55283 916 aa13.36□□□□□ -0.27
HDAC6-227ENST00000485102 KCNMA1Q12791 1236 aa13.36□□□□□ -0.27
HDAC6-227ENST00000485102 ZNF177Q13360 481 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-227ENST00000485102 ACCSLQ4AC99 568 aa13.36□□□□□ -0.27
HDAC6-227ENST00000485102 HORMAD1Q86X24 394 aa13.36□□□□□ -0.27
HDAC6-227ENST00000485102 CIR1Q86X95 450 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-227ENST00000485102 DCP2Q8IU60 420 aaKnown RBP13.36□□□□□ -0.27
HDAC6-227ENST00000485102 DEFB106AQ8N104 65 aa13.36□□□□□ -0.27
HDAC6-227ENST00000485102 WDTC1Q8N5D0 677 aa13.36□□□□□ -0.27
HDAC6-227ENST00000485102 FAM181AQ8N9Y4 354 aa13.36□□□□□ -0.27
HDAC6-227ENST00000485102 HIC2Q96JB3 615 aa13.36□□□□□ -0.27
HDAC6-227ENST00000485102 ZNF578Q96N58 590 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-227ENST00000485102 RPRD1AQ96P16 312 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-227ENST00000485102 INTS2Q9H0H0 1204 aaKnown RBP13.36□□□□□ -0.27
HDAC6-227ENST00000485102 USP29Q9HBJ7 922 aa13.36□□□□□ -0.27
HDAC6-227ENST00000485102 UBE2TQ9NPD8 197 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-227ENST00000485102 PCDHGC3Q9UN70 934 aa13.36□□□□□ -0.27
HDAC6-227ENST00000485102 FARP1Q9Y4F1 1045 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-227ENST00000485102 PIAS2O75928 621 aa13.35□□□□□ -0.27
HDAC6-227ENST00000485102 AFPP02771 609 aaKnown RBP13.35□□□□□ -0.27
HDAC6-227ENST00000485102 PRB1P04280 392 aa13.35□□□□□ -0.27
HDAC6-227ENST00000485102 THEGLP0DJG4 465 aa13.35□□□□□ -0.27
HDAC6-227ENST00000485102 KRT5P13647 590 aa13.35□□□□□ -0.27
HDAC6-227ENST00000485102 ZNF18P17022 549 aa13.35□□□□□ -0.27
HDAC6-227ENST00000485102 BMP6P22004 513 aa13.35□□□□□ -0.27
HDAC6-227ENST00000485102 GNA15P30679 374 aa13.35□□□□□ -0.27
HDAC6-227ENST00000485102 CLCN6P51797 869 aa13.35□□□□□ -0.27
HDAC6-227ENST00000485102 KRT83P78385 493 aa13.35□□□□□ -0.27
HDAC6-227ENST00000485102 ZNF284Q2VY69 593 aa13.35□□□□□ -0.27
HDAC6-227ENST00000485102 HS1BP3Q53T59 392 aa13.35□□□□□ -0.27
HDAC6-227ENST00000485102 ACBD5Q5T8D3 534 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-227ENST00000485102 IGF2-ASQ6U949 168 aa13.35□□□□□ -0.27
HDAC6-227ENST00000485102 Q6ZVU0 165 aa13.35□□□□□ -0.27
HDAC6-227ENST00000485102 ABI3BPQ7Z7G0 1075 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms