RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 PPP2CAP67775 309 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 KCNMA1Q12791 1236 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 CAMK2BQ13554 666 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 KLHDC7AQ5VTJ3 777 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 AGBL4Q5VU57 503 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 ARCQ7LC44 396 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 BNIPLQ7Z465 357 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 TMIEQ8NEW7 156 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 PIP4K2CQ8TBX8 421 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 TUBGCP2Q9BSJ2 902 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 TKTL2Q9H0I9 626 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 PREBQ9HCU5 417 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 CHMP5Q9NZZ3 219 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 LHX6Q9UPM6 363 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 AKAP13Q12802 2813 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 IGLV3-10A0A075B6K4 115 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 ENC1O14682 589 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 LDOC1O95751 146 aaPredicted RBP11.76□□□□□ -0.53
SCFD1-206ENST00000484733 LSM8O95777 96 aaKnown RBP11.76□□□□□ -0.53
SCFD1-206ENST00000484733 ITGAVP06756 1048 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 SRCP12931 536 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 CYP11B1P15538 503 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 EPHA8P29322 1005 aaPredicted RBP11.76□□□□□ -0.53
SCFD1-206ENST00000484733 CLCN6P51797 869 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 IL9RQ01113 521 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 DRAP1Q14919 205 aaPredicted RBP11.76□□□□□ -0.53
SCFD1-206ENST00000484733 SLC25A52Q3SY17 297 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 ACCSLQ4AC99 568 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 ARTNQ5T4W7 220 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 NEK5Q6P3R8 708 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 KANSL1Q7Z3B3 1105 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 TMPRSS12Q86WS5 348 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 XYLT1Q86Y38 959 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 C18orf8Q96DM3 657 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 CCDC114Q96M63 670 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 C2orf49Q9BVC5 232 aaPredicted RBP11.76□□□□□ -0.53
SCFD1-206ENST00000484733 RALYQ9UKM9 306 aaKnown RBP11.76□□□□□ -0.53
SCFD1-206ENST00000484733 GPSM3Q9Y4H4 160 aa11.76□□□□□ -0.53
SCFD1-206ENST00000484733 GOLGA8CPA6NN73 597 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 RTN2O75298 545 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 CNTN5O94779 1100 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 RHOCP08134 193 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 ZNF18P17022 549 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 ARRB1P49407 418 aaPredicted RBP11.75□□□□□ -0.53
SCFD1-206ENST00000484733 SULT1E1P49888 294 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 METAP1P53582 386 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 DEUP1Q05D60 604 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 CCDC15Q0P6D6 951 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 CNTN1Q12860 1018 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 ZNF783Q6ZMS7 281 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 ERICH1Q86X53 443 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 TSC1Q92574 1164 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 HAPLN3Q96S86 360 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 SIK2Q9H0K1 926 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 MUC3BQ9H195 1237 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 PLCB1Q9NQ66 1216 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 ANLNQ9NQW6 1124 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 FARP1Q9Y4F1 1045 aaPredicted RBP11.75□□□□□ -0.53
SCFD1-206ENST00000484733 CXorf51AA0A1B0GTR3 108 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 I6L893 689 aaPredicted RBP11.75□□□□□ -0.53
SCFD1-206ENST00000484733 PNMA6AP0CW24 399 aaPredicted RBP11.75□□□□□ -0.53
SCFD1-206ENST00000484733 TFE3P19532 575 aaPredicted RBP11.75□□□□□ -0.53
SCFD1-206ENST00000484733 ADAMTS20P59510 1910 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 SETMARQ53H47 684 aaPredicted RBP11.75□□□□□ -0.53
SCFD1-206ENST00000484733 ALFQ53S48 1182 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 SFMBT2Q5VUG0 894 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 LRRC31Q6UY01 552 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 Q6ZVU0 165 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 SPATS2Q86XZ4 545 aaKnown RBP11.75□□□□□ -0.53
SCFD1-206ENST00000484733 GATAD2AQ86YP4 633 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 PDCD7Q8N8D1 485 aaKnown RBP11.75□□□□□ -0.53
SCFD1-206ENST00000484733 DCAF4L2Q8NA75 395 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 CNDP2Q96KP4 475 aaKnown RBP11.75□□□□□ -0.53
SCFD1-206ENST00000484733 TBCBQ99426 244 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 STK33Q9BYT3 514 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 PDCL3Q9H2J4 239 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 SCUBE2Q9NQ36 999 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 TMEM59LQ9UK28 342 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 FHOD1Q9Y613 1164 aa11.75□□□□□ -0.53
SCFD1-206ENST00000484733 PRAMEF26H0Y7S4 382 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 PLK4O00444 970 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 ENDOD1O94919 500 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 CHRNA3P32297 505 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 TAS2R38P59533 333 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 SLC20A2Q08357 652 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 DPCR1Q3MIW9 517 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 PRAMEF14Q5SWL7 426 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 C6orf118Q5T5N4 469 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 PIP5KL1Q5T9C9 394 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 ZNF677Q86XU0 584 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 CACTIN-AS1Q8N1I8 211 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 MSANTD4Q8NCY6 345 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 OR2A12Q8NGT7 310 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 RETREG1Q9H6L5 497 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 VPS51Q9UID3 782 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 ILVBLA1L0T0 632 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 TRABD2BA6NFA1 517 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 RFPL3O75679 317 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 PRNPP04156 253 aa11.74□□□□□ -0.53
SCFD1-206ENST00000484733 CTSLP07711 333 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms