RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SRCP12931 536 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 SLC8A1P32418 973 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 PRKCIP41743 596 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 DPP6P42658 865 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 ZNF143P52747 638 aaPredicted RBP12.59□□□□□ -0.39
MSH5-216ENST00000484309 ZBTB16Q05516 673 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 ARID5BQ14865 1188 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 DLG2Q15700 870 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 POM121L1PQ3SYA9 428 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 PPM1JQ5JR12 505 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 C6orf118Q5T5N4 469 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 LRSAM1Q6UWE0 723 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 SETD3Q86TU7 594 aaPredicted RBP12.59□□□□□ -0.39
MSH5-216ENST00000484309 SH2D3CQ8N5H7 860 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 AADATQ8N5Z0 425 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 ZNF653Q96CK0 615 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 PPP1R9BQ96SB3 815 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 OMDQ99983 421 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 C2orf49Q9BVC5 232 aaPredicted RBP12.59□□□□□ -0.39
MSH5-216ENST00000484309 XPO4Q9C0E2 1151 aaKnown RBP12.59□□□□□ -0.39
MSH5-216ENST00000484309 BTBD1Q9H0C5 482 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 NDFIP2Q9NV92 336 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 DNAI1Q9UI46 699 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 SLC6A14Q9UN76 642 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 NCKAP1Q9Y2A7 1128 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 ACTL7AQ9Y615 435 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 SHROOM3Q8TF72 1996 aa12.59□□□□□ -0.39
MSH5-216ENST00000484309 CBX4O00257 560 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 SMAD6O43541 496 aaKnown RBP12.58□□□□□ -0.4
MSH5-216ENST00000484309 ATP9BO43861 1147 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 LRIG2O94898 1065 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 FTLP02792 175 aaPredicted RBP12.58□□□□□ -0.4
MSH5-216ENST00000484309 PLEKP08567 350 aaPredicted RBP12.58□□□□□ -0.4
MSH5-216ENST00000484309 PSMA2P25787 234 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 HOXD12P35452 270 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 ACVRL1P37023 503 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 KRT83P78385 493 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 GFPT1Q06210 699 aaPredicted RBP12.58□□□□□ -0.4
MSH5-216ENST00000484309 MAMLD1Q13495 774 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 ELAVL3Q14576 367 aaKnown RBP12.58□□□□□ -0.4
MSH5-216ENST00000484309 FIGNQ5HY92 759 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 MANEALQ5VSG8 457 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 TMC6Q7Z403 805 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 SLFN11Q7Z7L1 901 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 HDDC3Q8N4P3 179 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 DCAF4L2Q8NA75 395 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 ATP11CQ8NB49 1132 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 RNF214Q8ND24 703 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 CADM4Q8NFZ8 388 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 CEP76Q8TAP6 659 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 NTAN1Q96AB6 310 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 TBC1D31Q96DN5 1066 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 CNPY3Q9BT09 278 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.58□□□□□ -0.4
MSH5-216ENST00000484309 EDEM3Q9BZQ6 932 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 TRIM7Q9C029 511 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 OSBPL2Q9H1P3 480 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 NEUROG2Q9H2A3 272 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 TSPY26PQ9H489 355 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 CAPN10Q9HC96 672 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 ATP13A1Q9HD20 1204 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 TMEM51Q9NW97 253 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 GPATCH2LQ9NWQ4 482 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 MYO1AQ9UBC5 1043 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 PPARGC1AQ9UBK2 798 aaKnown RBP12.58□□□□□ -0.4
MSH5-216ENST00000484309 CNOT8Q9UFF9 292 aaKnown RBP12.58□□□□□ -0.4
MSH5-216ENST00000484309 SARDHQ9UL12 918 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 NEU3Q9UQ49 428 aa12.58□□□□□ -0.4
MSH5-216ENST00000484309 ILVBLA1L0T0 632 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 CREB3O43889 395 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 RTN2O75298 545 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 ADH1BP00325 375 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 GYPCP04921 128 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 GNSP15586 552 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 ATXN3P54252 364 aaPredicted RBP12.57□□□□□ -0.4
MSH5-216ENST00000484309 NRG1Q02297 640 aaPredicted RBP12.57□□□□□ -0.4
MSH5-216ENST00000484309 GNA12Q03113 381 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 ZNF252P-AS1Q0IIN9 211 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 EFHC2Q5JST6 749 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 ACBD5Q5T8D3 534 aaPredicted RBP12.57□□□□□ -0.4
MSH5-216ENST00000484309 HGSNATQ68CP4 663 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 PLEKHA7Q6IQ23 1121 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 LAYNQ6UX15 382 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 LEKR1Q6ZMV7 388 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 USP30Q70CQ3 517 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 RABEPKQ7Z6M1 372 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 NLRP14Q86W24 1093 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 DNASE2BQ8WZ79 361 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 OR8D1Q8WZ84 308 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 BIRC7Q96CA5 298 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 TNKS2Q9H2K2 1166 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 SGK2Q9HBY8 427 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 PARVAQ9NVD7 372 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 SUSD2Q9UGT4 822 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 FZD10Q9ULW2 581 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 SCML1Q9UN30 329 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 HS3ST2Q9Y278 367 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.57□□□□□ -0.4
MSH5-216ENST00000484309 TRPM6Q9BX84 2022 aa12.57□□□□□ -0.4
MSH5-216ENST00000484309 PCNX2A6NKB5 2137 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms