RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 RETREG1Q9H6L5 497 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 PRSS16Q9NQE7 514 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 ABCB8Q9NUT2 735 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 SEPT11Q9NVA2 429 aaKnown RBP10.3□□□□□ -0.76
CPSF4-213ENST00000484112 ARHGEF38Q9NXL2 777 aa10.3□□□□□ -0.76
CPSF4-213ENST00000484112 F5H5T6 163 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 CBX4O00257 560 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 PCDHGA12O60330 932 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 RTN2O75298 545 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 GRAP2O75791 330 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 GYPCP04921 128 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 ITPKBP27987 946 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 HOXD9P28356 352 aaPredicted RBP10.29□□□□□ -0.76
CPSF4-213ENST00000484112 SULT1E1P49888 294 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 AIF1P55008 147 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 SEMG2Q02383 582 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 C19orf57Q0VDD7 668 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 SLC12A1Q13621 1099 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 INAVAQ3KP66 663 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 ARL13BQ3SXY8 428 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 TTC31Q49AM3 519 aaPredicted RBP10.29□□□□□ -0.76
CPSF4-213ENST00000484112 C5orf22Q49AR2 442 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 ZC3H12AQ5D1E8 599 aaKnown RBP10.29□□□□□ -0.76
CPSF4-213ENST00000484112 RABGAP1LQ5R372 815 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 MBLAC2Q68D91 279 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 ADIPOR2Q86V24 386 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 VSTM4Q8IW00 320 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 MCOLN2Q8IZK6 566 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 AHI1Q8N157 1196 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 SLC30A5Q8TAD4 765 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 ADAM32Q8TC27 787 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 RNF34Q969K3 372 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 SLC6A18Q96N87 628 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 HAPLN3Q96S86 360 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 C11orf70Q9BRQ4 267 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 SELENOOQ9BVL4 669 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 ACE2Q9BYF1 805 aaPredicted RBP10.29□□□□□ -0.76
CPSF4-213ENST00000484112 MTG2Q9H4K7 406 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 WDCPQ9H6R7 721 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 SGK2Q9HBY8 427 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 OSGEPQ9NPF4 335 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 PARVAQ9NVD7 372 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 SUN2Q9UH99 717 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 GGA2Q9UJY4 613 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 NCKAP1Q9Y2A7 1128 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 AK5Q9Y6K8 562 aa10.29□□□□□ -0.76
CPSF4-213ENST00000484112 URB1O60287 2271 aaKnown RBP10.29□□□□□ -0.76
CPSF4-213ENST00000484112 TCRBV5S1A1TA0A578 114 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 C2CD4BA6NLJ0 364 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 GOLGA8SH3BPF8 625 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 ENC1O14682 589 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 LDOC1O95751 146 aaPredicted RBP10.28□□□□□ -0.76
CPSF4-213ENST00000484112 ATP5BP06576 529 aaKnown RBP10.28□□□□□ -0.76
CPSF4-213ENST00000484112 ITGAVP06756 1048 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 PABPC1P11940 636 aaKnown RBP10.28□□□□□ -0.76
CPSF4-213ENST00000484112 PDGFRAP16234 1089 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 POLR2EP19388 210 aaKnown RBP10.28□□□□□ -0.76
CPSF4-213ENST00000484112 TACR2P21452 398 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 SLC6A4P31645 630 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 CASP14P31944 242 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 FLT3P36888 993 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 CTSKP43235 329 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 RNASE9P60153 205 aaKnown RBP10.28□□□□□ -0.76
CPSF4-213ENST00000484112 ZBTB16Q05516 673 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 DEUP1Q05D60 604 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 DNAJC3Q13217 504 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 NME3Q13232 169 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 TSR1Q2NL82 804 aaKnown RBP10.28□□□□□ -0.76
CPSF4-213ENST00000484112 PPP1R15BQ5SWA1 713 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 C6orf118Q5T5N4 469 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 HGSNATQ68CP4 663 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 ZNF776Q68DI1 518 aaPredicted RBP10.28□□□□□ -0.76
CPSF4-213ENST00000484112 KIAA0895LQ68EN5 471 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 NADSYN1Q6IA69 706 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 DNAJC24Q6P3W2 148 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 LRRC69Q6ZNQ3 347 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 ZNF571Q7Z3V5 609 aaPredicted RBP10.28□□□□□ -0.76
CPSF4-213ENST00000484112 KIAA0907Q7Z7F0 614 aaPredicted RBP10.28□□□□□ -0.76
CPSF4-213ENST00000484112 TMPRSS12Q86WS5 348 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 CNGA4Q8IV77 575 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 RNF214Q8ND24 703 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 OR8K1Q8NGG5 319 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 FIBINQ8TAL6 211 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 FNIP1Q8TF40 1166 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 SLC39A7Q92504 469 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 CENPIQ92674 756 aaPredicted RBP10.28□□□□□ -0.76
CPSF4-213ENST00000484112 CNDP2Q96KP4 475 aaKnown RBP10.28□□□□□ -0.76
CPSF4-213ENST00000484112 UBL7Q96S82 380 aaPredicted RBP10.28□□□□□ -0.76
CPSF4-213ENST00000484112 DNAJC7Q99615 494 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 PRMT1Q99873 361 aaKnown RBP10.28□□□□□ -0.76
CPSF4-213ENST00000484112 NCAPGQ9BPX3 1015 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 ISCUQ9H1K1 167 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 MRPL47Q9HD33 250 aaKnown RBP10.28□□□□□ -0.76
CPSF4-213ENST00000484112 AASDHPPTQ9NRN7 309 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 METTL5Q9NRN9 209 aaKnown RBP10.28□□□□□ -0.76
CPSF4-213ENST00000484112 PIGVQ9NUD9 493 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 ZNHIT6Q9NWK9 470 aaKnown RBP10.28□□□□□ -0.76
CPSF4-213ENST00000484112 STIM2Q9P246 746 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 SCINQ9Y6U3 715 aa10.28□□□□□ -0.76
CPSF4-213ENST00000484112 NUMA1Q14980 2115 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms