RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 DYNLT1P63172 113 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 CCINQ13939 588 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 RAB41Q5JT25 222 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 C10orf120Q5SQS8 335 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 LY6G5CQ5SRR4 150 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 ERMARDQ5T6L9 678 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 DENND2CQ68D51 928 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 TXNRD3NBQ6F5E7 133 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 RHBDF2Q6PJF5 856 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 TMC3Q7Z5M5 1100 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 PCGF5Q86SE9 256 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 HOOK3Q86VS8 718 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 CPA6Q8N4T0 437 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 TSEN2Q8NCE0 465 aaKnown RBP7.13□□□□□ -1.27
BRCA1-216ENST00000484087 PDZD8Q8NEN9 1154 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 ADAM32Q8TC27 787 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 FBXO25Q8TCJ0 367 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 P3H4Q92791 437 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 NKD2Q969F2 451 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-216ENST00000484087 CLDN23Q96B33 292 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 HAUS1Q96CS2 278 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 KLF16Q9BXK1 252 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-216ENST00000484087 FOXP3Q9BZS1 431 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 NEUROG2Q9H2A3 272 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 CHRDQ9H2X0 955 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 PRDM16Q9HAZ2 1276 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 TLR8Q9NR97 1041 aaKnown RBP7.13□□□□□ -1.27
BRCA1-216ENST00000484087 ZDHHC18Q9NUE0 388 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 GOLGA6AQ9NYA3 693 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 RRN3Q9NYV6 651 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 SFMBT1Q9UHJ3 866 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 ANAPC5Q9UJX4 755 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 SCML2Q9UQR0 700 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 PLAAQ9Y263 795 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 R3HDM2Q9Y2K5 976 aaKnown RBP7.13□□□□□ -1.27
BRCA1-216ENST00000484087 SH3BP1Q9Y3L3 701 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 USP3Q9Y6I4 520 aa7.13□□□□□ -1.27
BRCA1-216ENST00000484087 C3orf70A6NLC5 250 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-216ENST00000484087 ZNF487B1APH4 448 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 NEDD8-MDP1E9PL57 170 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 APOC4-APOC2K7ER74 178 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 MAN2B1O00754 1011 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 APOL1O14791 398 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 STC2O76061 302 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 SYF2O95926 243 aaKnown RBP7.12□□□□□ -1.27
BRCA1-216ENST00000484087 ZBED1O96006 694 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 APOC2P02655 101 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 KLKB1P03952 638 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 MYZAPP0CAP1 466 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 TDGF1P13385 188 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 TGM2P21980 687 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 STIP1P31948 543 aaKnown RBP7.12□□□□□ -1.27
BRCA1-216ENST00000484087 ARL4AP40617 200 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 SULT1E1P49888 294 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 SGSHP51688 502 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 ARSEP51690 589 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 AIF1P55008 147 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 DAOAP59103 153 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 YWHAGP61981 247 aaKnown RBP eCLIP7.12□□□□□ -1.27
BRCA1-216ENST00000484087 PITX1P78337 314 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-216ENST00000484087 OTUD4Q01804 1114 aaKnown RBP7.12□□□□□ -1.27
BRCA1-216ENST00000484087 PDGFRLQ15198 375 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 DHCR24Q15392 516 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 TAF5Q15542 800 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 TRIP13Q15645 432 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-216ENST00000484087 TAZQ16635 292 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 ANO4Q32M45 955 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 SLC25A52Q3SY17 297 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 TMEM196Q5HYL7 178 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 CEP85LQ5SZL2 805 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 TMCO4Q5TGY1 634 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 EMC10Q5UCC4 262 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 SNX30Q5VWJ9 437 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 TRMT10CQ7L0Y3 403 aaKnown RBP7.12□□□□□ -1.27
BRCA1-216ENST00000484087 BZW1Q7L1Q6 419 aaKnown RBP7.12□□□□□ -1.27
BRCA1-216ENST00000484087 CCDC25Q86WR0 208 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 RALGPS2Q86X27 583 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-216ENST00000484087 TMEM25Q86YD3 366 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 PSTKQ8IV42 348 aaKnown RBP7.12□□□□□ -1.27
BRCA1-216ENST00000484087 IQCKQ8N0W5 287 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 DEFB106AQ8N104 65 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 ALLCQ8N6M5 410 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 ARFGAP1Q8N6T3 406 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 RPLP0P6Q8NHW5 317 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 FAM76AQ8TAV0 307 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 ACTL9Q8TC94 416 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 OVCA2Q8WZ82 227 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 ATP2A3Q93084 1043 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 CEP295NLQ96MC4 621 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 HHIPQ96QV1 700 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 SH3GL2Q99962 352 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 P2RY13Q9BPV8 354 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 FERMT1Q9BQL6 677 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 ZNF670Q9BS34 389 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 HERPUD2Q9BSE4 406 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 PABPC3Q9H361 631 aaKnown RBP7.12□□□□□ -1.27
BRCA1-216ENST00000484087 FBXO44Q9H4M3 255 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 C8orf33Q9H7E9 229 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-216ENST00000484087 POPDC2Q9HBU9 364 aa7.12□□□□□ -1.27
BRCA1-216ENST00000484087 PCDH9Q9HC56 1237 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms