RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 COLEC12Q5KU26 742 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 TBC1D3GQ6DHY5 549 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 TBC1D3CQ6IPX1 549 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 TAF2Q6P1X5 1199 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 CLEC9AQ6UXN8 241 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 PIK3AP1Q6ZUJ8 805 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 MCM10Q7L590 875 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 ARHGAP12Q8IWW6 846 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 TBC1D3Q8IZP1 549 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-214ENST00000483925 OR4N4Q8N0Y3 316 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 TMEM116Q8NCL8 245 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 SLC35B2Q8TB61 432 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 UTP15Q8TED0 518 aaKnown RBP4.7□□□□□ -1.66
PTCD3-214ENST00000483925 HSPH1Q92598 858 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 ZG16BQ96DA0 208 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 MCRS1Q96EZ8 462 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 TSGA13Q96PP4 275 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 ABHD1Q96SE0 405 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 PRRX2Q99811 253 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 TUBB6Q9BUF5 446 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 PTDSS2Q9BVG9 487 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 HERC2P3Q9BVR0 1158 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 FUT8Q9BYC5 575 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 SLC6A15Q9H2J7 730 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 MMADHCQ9H3L0 296 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-214ENST00000483925 NRDE2Q9H7Z3 1164 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 AGO3Q9H9G7 860 aaKnown RBP4.7□□□□□ -1.66
PTCD3-214ENST00000483925 LTB4R2Q9NPC1 389 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 SPATS2LQ9NUQ6 558 aaKnown RBP4.7□□□□□ -1.66
PTCD3-214ENST00000483925 ETAA1Q9NY74 926 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 CACNG4Q9UBN1 327 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 SESN1Q9Y6P5 492 aa4.7□□□□□ -1.66
PTCD3-214ENST00000483925 TEX13CA0A0J9YWL9 993 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 A0A1W2PQM1 296 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 AGAP5A6NIR3 686 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 A8MZ25 164 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 PLOD2O00469 737 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 CTIFO43310 598 aaKnown RBP4.69□□□□□ -1.66
PTCD3-214ENST00000483925 CBFA2T3O75081 653 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 PNPP00491 289 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 RB1P06400 928 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 EEF2P13639 858 aaKnown RBP4.69□□□□□ -1.66
PTCD3-214ENST00000483925 SELLP14151 372 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 HGFP14210 728 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 FDPSP14324 419 aaKnown RBP4.69□□□□□ -1.66
PTCD3-214ENST00000483925 CD19P15391 556 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 ZNF8P17098 575 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-214ENST00000483925 GAP43P17677 238 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 PTAFRP25105 342 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 NTSR1P30989 418 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 CIITAP33076 1130 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 TTKP33981 857 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 PBX3P40426 434 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 SLC15A1P46059 708 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 STAT2P52630 851 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 RCAN1P53805 252 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 NPEPPSP55786 919 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 BPIFB4P59827 614 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 SCN1BQ07699 218 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 CRHR2Q13324 411 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 MRPL49Q13405 166 aaKnown RBP4.69□□□□□ -1.66
PTCD3-214ENST00000483925 CAMK2DQ13557 499 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 CBFBQ13951 182 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 BAATQ14032 418 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-214ENST00000483925 TRIM29Q14134 588 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 E2F2Q14209 437 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 RRP1BQ14684 758 aaKnown RBP4.69□□□□□ -1.66
PTCD3-214ENST00000483925 ACOX1Q15067 660 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 PPA1Q15181 289 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 AAK1Q2M2I8 961 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 C15orf59Q2T9L4 293 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-214ENST00000483925 PTCHD3Q3KNS1 767 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 KRBOX4Q5JUW0 171 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 MEX3CQ5U5Q3 659 aaKnown RBP4.69□□□□□ -1.66
PTCD3-214ENST00000483925 ANKRD40Q6AI12 368 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 CCDC144NLQ6NUI1 221 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 CAVIN1Q6NZI2 390 aaKnown RBP4.69□□□□□ -1.66
PTCD3-214ENST00000483925 CRELD2Q6UXH1 353 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-214ENST00000483925 UNC5DQ6UXZ4 953 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 ZNF627Q7L945 461 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 PLPPR4Q7Z2D5 763 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 NUP54Q7Z3B4 507 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 MON1AQ86VX9 555 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 RHPN2Q8IUC4 686 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 LURAP1LQ8IV03 231 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 LINC00346Q8IVM7 164 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.69□□□□□ -1.66
PTCD3-214ENST00000483925 CFAP52Q8N1V2 620 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 ANKRD35Q8N283 1001 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 DPP10Q8N608 796 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 ZFP28Q8NHY6 868 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 KIF18AQ8NI77 898 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 RABGGTAQ92696 567 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 KRT35Q92764 455 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 RNFT2Q96EX2 444 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 CCDC114Q96M63 670 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 CFAP57Q96MR6 1250 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 TRIB1Q96RU8 372 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 FIZ1Q96SL8 496 aa4.69□□□□□ -1.66
PTCD3-214ENST00000483925 NPAS1Q99742 590 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms