RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 FAM181AQ8N9Y4 354 aa13.26□□□□□ -0.29
UBR4-213ENST00000483922 SNX21Q969T3 373 aa13.26□□□□□ -0.29
UBR4-213ENST00000483922 ARRDC3Q96B67 414 aa13.26□□□□□ -0.29
UBR4-213ENST00000483922 FEM1AQ9BSK4 669 aa13.26□□□□□ -0.29
UBR4-213ENST00000483922 SLC4A5Q9BY07 1137 aa13.26□□□□□ -0.29
UBR4-213ENST00000483922 POLR1BQ9H9Y6 1135 aa13.26□□□□□ -0.29
UBR4-213ENST00000483922 UBR5O95071 2799 aaPredicted RBP13.26□□□□□ -0.29
UBR4-213ENST00000483922 COL6A6A6NMZ7 2263 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 A0A1W2PQU0 124 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 TYW5A2RUC4 315 aaKnown RBP13.25□□□□□ -0.29
UBR4-213ENST00000483922 TRIM49BA6NDI0 452 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 K7ERQ8 282 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 KLK10O43240 276 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 EFSO43281 561 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 PIAS2O75928 621 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 FBXO21O94952 628 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 TRUB2O95900 331 aaKnown RBP13.25□□□□□ -0.29
UBR4-213ENST00000483922 TGM2P21980 687 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 TMPRSS3P57727 454 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 DAB2P98082 770 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 RHDQ02161 417 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 CENPCQ03188 943 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 ARTNQ5T4W7 220 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 KIAA1614Q5VZ46 1190 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 RNF219Q5W0B1 726 aaPredicted RBP13.25□□□□□ -0.29
UBR4-213ENST00000483922 FBXL22Q6P050 247 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 GCNT7Q6ZNI0 430 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 BEND5Q7L4P6 421 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 RRAGAQ7L523 313 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 C14orf80Q86SX3 495 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 CHSY1Q86X52 802 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 VCPIP1Q96JH7 1222 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 BTN2A3PQ96KV6 586 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 KREMEN1Q96MU8 473 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 ACP6Q9NPH0 428 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 KLF15Q9UIH9 416 aa13.25□□□□□ -0.29
UBR4-213ENST00000483922 K7ESM1 405 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 SMAD6O43541 496 aaKnown RBP13.24□□□□□ -0.29
UBR4-213ENST00000483922 LZTS3O60299 673 aaPredicted RBP13.24□□□□□ -0.29
UBR4-213ENST00000483922 MAGEC1O60732 1142 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 ZNF202O95125 648 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 C6P13671 934 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 NUDT1P36639 197 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 FMO5P49326 533 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 ERVPABLB-1P60509 514 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 YWHAEP62258 255 aaKnown RBP13.24□□□□□ -0.29
UBR4-213ENST00000483922 PNOCQ13519 176 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 SLC12A1Q13621 1099 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 FGL2Q14314 439 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 ISXQ2M1V0 245 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 ACCSLQ4AC99 568 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 SETMARQ53H47 684 aaPredicted RBP13.24□□□□□ -0.29
UBR4-213ENST00000483922 TPRG1LQ5T0D9 272 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 ABI3BPQ7Z7G0 1075 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 WDTC1Q8N5D0 677 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 SH2D3CQ8N5H7 860 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 CHST14Q8NCH0 376 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 OR2A12Q8NGT7 310 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 KCNE4Q8WWG9 221 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 OR8D1Q8WZ84 308 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 PSMB7Q99436 277 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 ANLNQ9NQW6 1124 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 GPR27Q9NS67 375 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 SATB2Q9UPW6 733 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 CNTN6Q9UQ52 1028 aa13.24□□□□□ -0.29
UBR4-213ENST00000483922 TDRD6O60522 2096 aaKnown RBP13.24□□□□□ -0.29
UBR4-213ENST00000483922 POM121BA6NF01 834 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 E5RJQ4 531 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 I6L893 689 aaPredicted RBP13.23□□□□□ -0.29
UBR4-213ENST00000483922 RAD51BO15315 384 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 SLC16A3O15427 465 aaKnown RBP13.23□□□□□ -0.29
UBR4-213ENST00000483922 SRCP12931 536 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 TBXAS1P24557 533 aaPredicted RBP13.23□□□□□ -0.29
UBR4-213ENST00000483922 GGCXP38435 758 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 NNMTP40261 264 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 SULT2A1Q06520 285 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 VAC14Q08AM6 782 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 SEL1L3Q68CR1 1132 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 TMEM110Q86TL2 294 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 LSMEM2Q8N112 164 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 PPM1KQ8N3J5 372 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 EXD3Q8N9H8 876 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 ERCC4Q92889 916 aaPredicted RBP13.23□□□□□ -0.29
UBR4-213ENST00000483922 CCDC47Q96A33 483 aaKnown RBP13.23□□□□□ -0.29
UBR4-213ENST00000483922 FAM149B1Q96BN6 582 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 SPATA32Q96LK8 384 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 SLC46A1Q96NT5 459 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 DPH1Q9BZG8 443 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 PREBQ9HCU5 417 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 ST7Q9NRC1 585 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.23□□□□□ -0.29
UBR4-213ENST00000483922 ARMCX3Q9UH62 379 aaPredicted RBP13.23□□□□□ -0.29
UBR4-213ENST00000483922 PNMA8BQ9ULN7 279 aaPredicted RBP13.23□□□□□ -0.29
UBR4-213ENST00000483922 ENTPD2Q9Y5L3 495 aa13.23□□□□□ -0.29
UBR4-213ENST00000483922 TCAF2A6NFQ2 919 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 CAPN8A6NHC0 703 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 F5H5T6 163 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 K7ENP7 123 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 SCAMP1O15126 338 aa13.22□□□□□ -0.29
UBR4-213ENST00000483922 ALOX15BO15296 676 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms