RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 NPWQ8N729 165 aa17.58■□□□□ 0.41
MRPL28-210ENST00000483764 MYEOVQ96EZ4 313 aa17.58■□□□□ 0.41
MRPL28-210ENST00000483764 CLDND1Q9NY35 253 aa17.58■□□□□ 0.41
MRPL28-210ENST00000483764 DONSONQ9NYP3 566 aa17.58■□□□□ 0.41
MRPL28-210ENST00000483764 NINJ2Q9NZG7 142 aa17.58■□□□□ 0.41
MRPL28-210ENST00000483764 NOTCH4Q99466 2003 aa17.58■□□□□ 0.41
MRPL28-210ENST00000483764 DOCK6Q96HP0 2047 aa17.58■□□□□ 0.4
MRPL28-210ENST00000483764 DENND4CQ5VZ89 1909 aa17.58■□□□□ 0.4
MRPL28-210ENST00000483764 E2F8A0AVK6 867 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 PRAMEF12O95522 483 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 WEE1P30291 646 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 DLX2Q07687 328 aaPredicted RBP17.57■□□□□ 0.4
MRPL28-210ENST00000483764 PDK1Q15118 436 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 P3H1Q32P28 736 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 ALFQ53S48 1182 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 RABGAP1LQ5R372 815 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 CES5AQ6NT32 575 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 DARS2Q6PI48 645 aaKnown RBP17.57■□□□□ 0.4
MRPL28-210ENST00000483764 C4orf22Q6V702 233 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 EP400NLQ6ZTU2 488 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 LRCH3Q96II8 777 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 FAM161BQ96MY7 647 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 OLFM3Q96PB7 478 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 SELENOSQ9BQE4 189 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 TMEM121Q9BTD3 319 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 KLC2Q9H0B6 622 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 S1PR5Q9H228 398 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 TMEM248Q9NWD8 314 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 CDH22Q9UJ99 828 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 TRDMT1O14717 391 aaKnown RBP17.57■□□□□ 0.4
MRPL28-210ENST00000483764 NCAM2O15394 837 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 TSPAN3O60637 253 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 TBX10O75333 385 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 ZNF189O75820 626 aaPredicted RBP17.57■□□□□ 0.4
MRPL28-210ENST00000483764 CHN1P15882 459 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 STIP1P31948 543 aaKnown RBP17.57■□□□□ 0.4
MRPL28-210ENST00000483764 MAGEA4P43358 317 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 ITIH4Q14624 930 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 PPP1R21Q6ZMI0 780 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 TFAP2DQ7Z6R9 452 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 BBS7Q8IWZ6 715 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 NPAS3Q8IXF0 933 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 FAM217AQ8IXS0 508 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 CFAP52Q8N1V2 620 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 CCDC33Q8N5R6 958 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 NETO2Q8NC67 525 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 ZSCAN18Q8TBC5 510 aaPredicted RBP17.57■□□□□ 0.4
MRPL28-210ENST00000483764 EPS8L3Q8TE67 593 aaKnown RBP17.57■□□□□ 0.4
MRPL28-210ENST00000483764 FGF13Q92913 245 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 ARHGEF2Q92974 986 aaKnown RBP17.57■□□□□ 0.4
MRPL28-210ENST00000483764 RBM15Q96T37 977 aaKnown RBP eCLIP17.57■□□□□ 0.42e-6■■□□□ 13.2
MRPL28-210ENST00000483764 GAS2L1Q99501 681 aaPredicted RBP17.57■□□□□ 0.4
MRPL28-210ENST00000483764 RETREG1Q9H6L5 497 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 C10orf88Q9H8K7 445 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 NDFIP2Q9NV92 336 aa17.57■□□□□ 0.4
MRPL28-210ENST00000483764 ZFP37Q9Y6Q3 630 aaPredicted RBP17.57■□□□□ 0.4
MRPL28-210ENST00000483764 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.56■□□□□ 0.4
MRPL28-210ENST00000483764 BCLAF3A2AJT9 711 aaKnown RBP17.56■□□□□ 0.4
MRPL28-210ENST00000483764 CFAP69A5D8W1 941 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 HACD1B0YJ81 288 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 ACSL3O95573 720 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 TCF3P15923 654 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 MX2P20592 715 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 PHBP35232 272 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 CHKAP35790 457 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 LTBRP36941 435 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 RPS24P62847 133 aaKnown RBP17.56■□□□□ 0.4
MRPL28-210ENST00000483764 COL19A1Q14993 1142 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 KCTD19Q17RG1 926 aaPredicted RBP17.56■□□□□ 0.4
MRPL28-210ENST00000483764 SLC45A4Q5BKX6 768 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 C6orf89Q6UWU4 347 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 ARHGEF18Q6ZSZ5 1173 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 CIR1Q86X95 450 aaPredicted RBP17.56■□□□□ 0.4
MRPL28-210ENST00000483764 CDKL3Q8IVW4 592 aaPredicted RBP17.56■□□□□ 0.4
MRPL28-210ENST00000483764 TP53INP2Q8IXH6 220 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 PPIL6Q8IXY8 311 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 UMODL1-AS1Q8N2C9 162 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 ATXN2LQ8WWM7 1075 aaKnown RBP17.56■□□□□ 0.4
MRPL28-210ENST00000483764 RSAD2Q8WXG1 361 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 CELF6Q96J87 481 aaKnown RBP17.56■□□□□ 0.4
MRPL28-210ENST00000483764 PRICKLE1Q96MT3 831 aaPredicted RBP17.56■□□□□ 0.4
MRPL28-210ENST00000483764 GDE1Q9NZC3 331 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 ZNF212Q9UDV6 495 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 SLC24A2Q9UI40 661 aa17.56■□□□□ 0.4
MRPL28-210ENST00000483764 PRRC2BQ5JSZ5 2229 aaKnown RBP17.55■□□□□ 0.4
MRPL28-210ENST00000483764 SGK1O00141 431 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 GFRA2O00451 464 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 PPP1R12AO14974 1030 aaPredicted RBP17.55■□□□□ 0.4
MRPL28-210ENST00000483764 ALOX15BO15296 676 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 FSBPO95073 299 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 DRD4P21917 467 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 SEC24CP53992 1094 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 CDH4P55283 916 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 GALNT2Q10471 571 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 ZNF77Q15935 545 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 RNASEH2BQ5TBB1 312 aaKnown RBP17.55■□□□□ 0.4
MRPL28-210ENST00000483764 TTC39BQ5VTQ0 682 aaPredicted RBP17.55■□□□□ 0.4
MRPL28-210ENST00000483764 AFMIDQ63HM1 303 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 CCDC121Q6ZUS5 278 aa17.55■□□□□ 0.4
MRPL28-210ENST00000483764 GET4Q7L5D6 327 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms