RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 C4orf50Q6ZRC1 276 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 CCDC149Q6ZUS6 474 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 ZNF534Q76KX8 674 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 OTOP3Q7RTS5 596 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 ACOT1Q86TX2 421 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 PRPF39Q86UA1 669 aaKnown RBP8.33□□□□□ -1.08
SORT1-205ENST00000483508 ZNF598Q86UK7 904 aaKnown RBP8.33□□□□□ -1.08
SORT1-205ENST00000483508 CRLF3Q8IUI8 442 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 NUDCD3Q8IVD9 361 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 LMNTD2Q8IXW0 634 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 CRYBG2Q8N1P7 616 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 FLCNQ8NFG4 579 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 CCDC110Q8TBZ0 833 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 DEPDC1BQ8WUY9 529 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 TFB1MQ8WVM0 346 aaKnown RBP8.33□□□□□ -1.08
SORT1-205ENST00000483508 MCUR1Q96AQ8 359 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 NAF1Q96HR8 494 aaKnown RBP8.33□□□□□ -1.08
SORT1-205ENST00000483508 PIWIL1Q96J94 861 aaKnown RBP8.33□□□□□ -1.08
SORT1-205ENST00000483508 SPATA13Q96N96 652 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 MRPL45Q9BRJ2 306 aaKnown RBP8.33□□□□□ -1.08
SORT1-205ENST00000483508 CADM1Q9BY67 442 aaKnown RBP8.33□□□□□ -1.08
SORT1-205ENST00000483508 ADAM33Q9BZ11 813 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 DHX35Q9H5Z1 703 aaKnown RBP8.33□□□□□ -1.08
SORT1-205ENST00000483508 SFXN1Q9H9B4 322 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 MRPL17Q9NRX2 175 aaKnown RBP8.33□□□□□ -1.08
SORT1-205ENST00000483508 TBC1D13Q9NVG8 400 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 ARL8BQ9NVJ2 186 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.33□□□□□ -1.08
SORT1-205ENST00000483508 SSX2IPQ9Y2D8 614 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 SNX9Q9Y5X1 595 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 RAD54BQ9Y620 910 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 MUC6Q6W4X9 2439 aa8.33□□□□□ -1.08
SORT1-205ENST00000483508 ZNF638Q14966 1978 aaKnown RBP8.33□□□□□ -1.08
SORT1-205ENST00000483508 KMT2EQ8IZD2 1858 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 CXorf49A8MYA2 514 aaPredicted RBP8.32□□□□□ -1.08
SORT1-205ENST00000483508 F8W8V4 182 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 H3BRJ5 948 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 XPO1O14980 1071 aaKnown RBP8.32□□□□□ -1.08
SORT1-205ENST00000483508 SNNO75324 88 aaPredicted RBP8.32□□□□□ -1.08
SORT1-205ENST00000483508 AVILO75366 819 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 URODP06132 367 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 CSH1P0DML2 217 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 CSH2P0DML3 217 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 MYL2P10916 166 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 PGAM1P18669 254 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 ATP6V1C1P21283 382 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 VHLP40337 213 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 GARSP41250 739 aaKnown RBP8.32□□□□□ -1.08
SORT1-205ENST00000483508 OR1G1P47890 313 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 SLC11A1P49279 550 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 RAP1GDS1P52306 607 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 AIF1P55008 147 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 NIPAL4Q0D2K0 466 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 BLMHQ13867 455 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 FRG1Q14331 258 aaKnown RBP8.32□□□□□ -1.08
SORT1-205ENST00000483508 CHI3L2Q15782 390 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 CA9Q16790 459 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 INSCQ1MX18 579 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 SV2CQ496J9 727 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 DNAL1Q4LDG9 190 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 TEX44Q53QW1 395 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 RAB6CQ53S08 254 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 PPP6R3Q5H9R7 873 aaPredicted RBP8.32□□□□□ -1.08
SORT1-205ENST00000483508 C6orf163Q5TEZ5 329 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 C9orf57Q5W0N0 161 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 NCBP2-AS2Q69YL0 99 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 ASTLQ6HA08 431 aaPredicted RBP8.32□□□□□ -1.08
SORT1-205ENST00000483508 NOTUMQ6P988 496 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 TMPRSS6Q8IU80 811 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 C12orf29Q8N999 325 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 STKLD1Q8NE28 680 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 ARMC2Q8NEN0 867 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 OR6B3Q8NGW1 331 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 HTR3CQ8WXA8 447 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 ATP2A3Q93084 1043 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 TNIP3Q96KP6 325 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 OLFM3Q96PB7 478 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 CSPG4P5Q96PW8 444 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 KCTD15Q96SI1 283 aaPredicted RBP8.32□□□□□ -1.08
SORT1-205ENST00000483508 MIPEPQ99797 713 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 TMEM175Q9BSA9 504 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 TRIM6Q9C030 488 aaPredicted RBP8.32□□□□□ -1.08
SORT1-205ENST00000483508 RAB6CQ9H0N0 254 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 SNX25Q9H3E2 840 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 DENND2DQ9H6A0 471 aaPredicted RBP8.32□□□□□ -1.08
SORT1-205ENST00000483508 PLAC1Q9HBJ0 212 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 SMYD2Q9NRG4 433 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 FAM49BQ9NUQ9 324 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 GDAP2Q9NXN4 497 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 DONSONQ9NYP3 566 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 MOCS1Q9NZB8 636 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 NKX1-2Q9UD57 310 aaPredicted RBP8.32□□□□□ -1.08
SORT1-205ENST00000483508 DNAJB4Q9UDY4 337 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 DPP7Q9UHL4 492 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 ADAM28Q9UKQ2 775 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 FZD10Q9ULW2 581 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 IRAK3Q9Y616 596 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 MAD1L1Q9Y6D9 718 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 USP3Q9Y6I4 520 aa8.32□□□□□ -1.08
SORT1-205ENST00000483508 SDR42E2A6NKP2 422 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms