RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 FAM237BA0A1B0GVD1 139 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 LPXNO60711 386 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 ANXA9O76027 345 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 USP1O94782 785 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 TNK2Q07912 1038 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 CDH17Q12864 832 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 ANO4Q32M45 955 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 C5orf22Q49AR2 442 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 ALFQ53S48 1182 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 KIAA1841Q6NSI8 718 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 KLHDC10Q6PID8 442 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 UNC5BQ8IZJ1 945 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 DNAAF3Q8N9W5 541 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 USP33Q8TEY7 942 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 IGSF8Q969P0 613 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 GRAMD1AQ96CP6 724 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 ZNF558Q96NG5 402 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 FCRL3Q96P31 734 aaPredicted RBP13.5□□□□□ -0.25
CPNE1-225ENST00000483495 PAIP2Q9BPZ3 127 aaKnown RBP13.5□□□□□ -0.25
CPNE1-225ENST00000483495 HERC2P3Q9BVR0 1158 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 IL22Q9GZX6 179 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 VPS11Q9H270 941 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 IPO11Q9UI26 975 aaKnown RBP13.5□□□□□ -0.25
CPNE1-225ENST00000483495 RPS6KL1Q9Y6S9 549 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 ZCWPW2A0A1B0GU75 182 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 CARNS1A5YM72 827 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 CNTN5O94779 1100 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 KIAA0754O94854 1291 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 SEC24AO95486 1093 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 HLA-DQB2P05538 268 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 HMGA1P17096 107 aaKnown RBP13.5□□□□□ -0.25
CPNE1-225ENST00000483495 ADRA1DP25100 572 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 GJA8P48165 433 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 HNRNPDQ14103 355 aaKnown RBP13.5□□□□□ -0.25
CPNE1-225ENST00000483495 RAP1GAP2Q684P5 730 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 PACS1Q6VY07 963 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 CCDC117Q8IWD4 279 aaPredicted RBP13.5□□□□□ -0.25
CPNE1-225ENST00000483495 CMTR2Q8IYT2 770 aaKnown RBP13.5□□□□□ -0.25
CPNE1-225ENST00000483495 ARMC5Q96C12 935 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 CERS2Q96G23 380 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 MYRFLQ96LU7 910 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 RETREG1Q9H6L5 497 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 SLC17A7Q9P2U7 560 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 DNMT3LQ9UJW3 386 aa13.5□□□□□ -0.25
CPNE1-225ENST00000483495 MAGED2Q9UNF1 606 aaPredicted RBP13.5□□□□□ -0.25
CPNE1-225ENST00000483495 USP15Q9Y4E8 981 aaPredicted RBP13.5□□□□□ -0.25
CPNE1-225ENST00000483495 ZNF840PA6NDX5 716 aa13.49□□□□□ -0.25
CPNE1-225ENST00000483495 EFCAB14O75071 495 aa13.49□□□□□ -0.25
CPNE1-225ENST00000483495 TIMP1P01033 207 aa13.49□□□□□ -0.25
CPNE1-225ENST00000483495 ADRA1AP35348 466 aa13.49□□□□□ -0.25
CPNE1-225ENST00000483495 ATP5C1P36542 298 aaKnown RBP13.49□□□□□ -0.25
CPNE1-225ENST00000483495 GEMP55040 296 aa13.49□□□□□ -0.25
CPNE1-225ENST00000483495 SEPT7Q16181 437 aaKnown RBP13.49□□□□□ -0.25
CPNE1-225ENST00000483495 LRRC26Q2I0M4 334 aa13.49□□□□□ -0.25
CPNE1-225ENST00000483495 ANKRD20A4Q4UJ75 823 aa13.49□□□□□ -0.25
CPNE1-225ENST00000483495 CERCAMQ5T4B2 595 aa13.49□□□□□ -0.25
CPNE1-225ENST00000483495 NADSYN1Q6IA69 706 aa13.49□□□□□ -0.25
CPNE1-225ENST00000483495 CGB2Q6NT52 195 aa13.49□□□□□ -0.25
CPNE1-225ENST00000483495 CHSY1Q86X52 802 aa13.49□□□□□ -0.25
CPNE1-225ENST00000483495 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.49□□□□□ -0.25
CPNE1-225ENST00000483495 SPATA22Q8NHS9 363 aa13.49□□□□□ -0.25
CPNE1-225ENST00000483495 HMCESQ96FZ2 354 aa13.49□□□□□ -0.25
CPNE1-225ENST00000483495 C11orf49Q9H6J7 331 aa13.49□□□□□ -0.25
CPNE1-225ENST00000483495 RBM22Q9NW64 420 aaKnown RBP eCLIP13.49□□□□□ -0.252e-6■■□□□ 11.7
CPNE1-225ENST00000483495 UBP1Q9NZI7 540 aa13.49□□□□□ -0.25
CPNE1-225ENST00000483495 PRKAG3Q9UGI9 489 aa13.49□□□□□ -0.25
CPNE1-225ENST00000483495 SOX13Q9UN79 622 aa13.49□□□□□ -0.25
CPNE1-225ENST00000483495 STARD13Q9Y3M8 1113 aa13.49□□□□□ -0.25
CPNE1-225ENST00000483495 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.48□□□□□ -0.25
CPNE1-225ENST00000483495 COPEO14579 308 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 HMBSP08397 361 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 LAG3P18627 525 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 ITGB8P26012 769 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 MAPKAPK2P49137 400 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 RENBPP51606 427 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 DEFB103AP81534 67 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 BMPR2Q13873 1038 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 DENND5AQ6IQ26 1287 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 FBXO46Q6PJ61 603 aaPredicted RBP13.48□□□□□ -0.25
CPNE1-225ENST00000483495 SPATA21Q7Z572 469 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 TFAP2DQ7Z6R9 452 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 TEX26Q8N6G2 289 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 LRRC8CQ8TDW0 803 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 ACMSDQ8TDX5 336 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 CCT6BQ92526 530 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 ZNF75CPQ92670 426 aaPredicted RBP13.48□□□□□ -0.25
CPNE1-225ENST00000483495 TRMT2BQ96GJ1 504 aaKnown RBP13.48□□□□□ -0.25
CPNE1-225ENST00000483495 TMEM169Q96HH4 297 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 SRPK1Q96SB4 655 aaKnown RBP13.48□□□□□ -0.25
CPNE1-225ENST00000483495 TBL1YQ9BQ87 522 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 KIFC1Q9BW19 673 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 PITPNM3Q9BZ71 974 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 NYNRINQ9P2P1 1898 aaKnown RBP13.48□□□□□ -0.25
CPNE1-225ENST00000483495 C2CD2LO14523 706 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 KIAA0355O15063 1070 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 EDF1O60869 148 aaKnown RBP13.48□□□□□ -0.25
CPNE1-225ENST00000483495 MT-CYBP00156 380 aaPredicted RBP13.48□□□□□ -0.25
CPNE1-225ENST00000483495 TACR2P21452 398 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 KCNQ1P51787 676 aa13.48□□□□□ -0.25
CPNE1-225ENST00000483495 YBEYP58557 167 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms