RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 TOE1Q96GM8 510 aaKnown RBP6.15□□□□□ -1.42
CSDE1-207ENST00000483407 SGSM3Q96HU1 749 aa6.15□□□□□ -1.42
CSDE1-207ENST00000483407 HNRNPABQ99729 332 aaKnown RBP6.15□□□□□ -1.42
CSDE1-207ENST00000483407 SPOCK3Q9BQ16 436 aa6.15□□□□□ -1.42
CSDE1-207ENST00000483407 SPATA9Q9BWV2 254 aa6.15□□□□□ -1.42
CSDE1-207ENST00000483407 CEP41Q9BYV8 373 aa6.15□□□□□ -1.42
CSDE1-207ENST00000483407 DCLK3Q9C098 648 aa6.15□□□□□ -1.42
CSDE1-207ENST00000483407 PRDM16Q9HAZ2 1276 aa6.15□□□□□ -1.42
CSDE1-207ENST00000483407 CYP3A43Q9HB55 503 aa6.15□□□□□ -1.42
CSDE1-207ENST00000483407 CD248Q9HCU0 757 aa6.15□□□□□ -1.42
CSDE1-207ENST00000483407 SSU72Q9NP77 194 aaKnown RBP6.15□□□□□ -1.42
CSDE1-207ENST00000483407 EXOC1Q9NV70 894 aa6.15□□□□□ -1.42
CSDE1-207ENST00000483407 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.15□□□□□ -1.42
CSDE1-207ENST00000483407 DMAC2Q9NW81 257 aa6.15□□□□□ -1.42
CSDE1-207ENST00000483407 PLK2Q9NYY3 685 aa6.15□□□□□ -1.42
CSDE1-207ENST00000483407 HMGXB4Q9UGU5 601 aa6.15□□□□□ -1.42
CSDE1-207ENST00000483407 FRMD4BQ9Y2L6 1034 aa6.15□□□□□ -1.42
CSDE1-207ENST00000483407 SLC27A6Q9Y2P4 619 aa6.15□□□□□ -1.42
CSDE1-207ENST00000483407 NFE2L3Q9Y4A8 694 aa6.15□□□□□ -1.42
CSDE1-207ENST00000483407 STON1Q9Y6Q2 735 aa6.15□□□□□ -1.42
CSDE1-207ENST00000483407 LAMA1P25391 3075 aa6.15□□□□□ -1.43
CSDE1-207ENST00000483407 GCN1Q92616 2671 aaKnown RBP6.15□□□□□ -1.43
CSDE1-207ENST00000483407 OBSL1O75147 1896 aa6.15□□□□□ -1.43
CSDE1-207ENST00000483407 EML5Q05BV3 1969 aa6.15□□□□□ -1.43
CSDE1-207ENST00000483407 ASH1LQ9NR48 2969 aaKnown RBP6.15□□□□□ -1.43
CSDE1-207ENST00000483407 WASH3PC4AMC7 463 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 PDXKO00764 312 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 MDM4O15151 490 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 BCAT2O15382 392 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-207ENST00000483407 TIMM44O43615 452 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 CALUO43852 315 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-207ENST00000483407 CLEC3AO75596 197 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 GJB3O75712 270 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 STC2O76061 302 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 CER1O95813 267 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 ASS1P00966 412 aaKnown RBP6.14□□□□□ -1.43
CSDE1-207ENST00000483407 PENKP01210 267 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-207ENST00000483407 HLA-DRAP01903 254 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 NR3C1P04150 777 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 MATKP42679 507 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 PGFP49763 221 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 VAMP7P51809 220 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 KIF11P52732 1056 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 MFAP3P55082 362 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 SLC8A3P57103 927 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 DLG4P78352 724 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 INCA1Q0VD86 236 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 SCAPQ12770 1279 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 EIF4HQ15056 248 aaKnown RBP6.14□□□□□ -1.43
CSDE1-207ENST00000483407 PLA2G4EQ3MJ16 856 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 ANKRD39Q53RE8 183 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 SPOPLQ6IQ16 392 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 INTS8Q75QN2 995 aaKnown RBP6.14□□□□□ -1.43
CSDE1-207ENST00000483407 RSRC2Q7L4I2 434 aaKnown RBP6.14□□□□□ -1.43
CSDE1-207ENST00000483407 GPRIN1Q7Z2K8 1008 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 CCDC186Q7Z3E2 898 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 ANKS1BQ7Z6G8 1248 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 GLRX5Q86SX6 157 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 TMPRSS6Q8IU80 811 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 ARHGAP18Q8N392 663 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 ZNF276Q8N554 614 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 ZCCHC9Q8N567 271 aaKnown RBP6.14□□□□□ -1.43
CSDE1-207ENST00000483407 TTC39CQ8N584 583 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 SETD7Q8WTS6 366 aaKnown RBP6.14□□□□□ -1.43
CSDE1-207ENST00000483407 DNASE2BQ8WZ79 361 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 PRCCQ92733 491 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-207ENST00000483407 CCDC47Q96A33 483 aaKnown RBP6.14□□□□□ -1.43
CSDE1-207ENST00000483407 CAMK1GQ96NX5 476 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 NUP58Q9BVL2 599 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 GPR174Q9BXC1 333 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 SLC6A17Q9H1V8 727 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 NMUR1Q9HB89 426 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 CD93Q9NPY3 652 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 ITM2CQ9NQX7 267 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 OSER1Q9NX31 292 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 WSB2Q9NYS7 404 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-207ENST00000483407 CLIC5Q9NZA1 410 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 USP36Q9P275 1121 aaKnown RBP6.14□□□□□ -1.43
CSDE1-207ENST00000483407 THAP10Q9P2Z0 257 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-207ENST00000483407 RASAL2Q9UJF2 1139 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 FBXO10Q9UK96 956 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 NUDT5Q9UKK9 219 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 CFAP45Q9UL16 551 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 THADAQ6YHU6 1953 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 FRYQ5TBA9 3013 aa6.14□□□□□ -1.43
CSDE1-207ENST00000483407 CEP295Q9C0D2 2601 aa6.13□□□□□ -1.43
CSDE1-207ENST00000483407 ANAPC1Q9H1A4 1944 aa6.13□□□□□ -1.43
CSDE1-207ENST00000483407 ANKRD34BA5PLL1 514 aa6.13□□□□□ -1.43
CSDE1-207ENST00000483407 C9orf172C9J069 976 aa6.13□□□□□ -1.43
CSDE1-207ENST00000483407 HHLA1C9JL84 531 aa6.13□□□□□ -1.43
CSDE1-207ENST00000483407 MAPK13O15264 365 aa6.13□□□□□ -1.43
CSDE1-207ENST00000483407 FLRT2O43155 660 aa6.13□□□□□ -1.43
CSDE1-207ENST00000483407 MYL1P05976 194 aa6.13□□□□□ -1.43
CSDE1-207ENST00000483407 HSP90AA1P07900 732 aaKnown RBP6.13□□□□□ -1.43
CSDE1-207ENST00000483407 HMBSP08397 361 aa6.13□□□□□ -1.43
CSDE1-207ENST00000483407 FAM153BP0C7A2 387 aa6.13□□□□□ -1.43
CSDE1-207ENST00000483407 ZNF883P0CG24 379 aa6.13□□□□□ -1.43
CSDE1-207ENST00000483407 KRT13P13646 458 aa6.13□□□□□ -1.43
CSDE1-207ENST00000483407 CD58P19256 250 aa6.13□□□□□ -1.43
CSDE1-207ENST00000483407 RPL13P26373 211 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms