RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	ARSB	P15848	533 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	TEC	P42680	631 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	RCAN1	P53805	252 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	SELENOV	P59797	346 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	ABAT	P80404	500 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	RHAG	Q02094	409 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	STARD3	Q14849	445 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	KRT71	Q3SY84	523 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	FNBP1L	Q5T0N5	605 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	CCDC181	Q5TID7	509 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	DCAF12L2	Q5VW00	463 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	AAGAB	Q6PD74	315 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	GATAD2A	Q86YP4	633 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	FAM186B	Q8IYM0	893 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	LRRC57	Q8N9N7	239 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	KDM1B	Q8NB78	822 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	B3GNT4	Q9C0J1	378 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	ARNT2	Q9HBZ2	717 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	OBP2B	Q9NPH6	170 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	NFU1	Q9UMS0	254 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	LZTS1	Q9Y250	596 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	DOCK7	Q96N67	2140 aa		3.55	□□□□□ -1.84
CCNL1-223	ENST00000481173	SRRM3	A6NNA2	597 aa	Predicted RBP	3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	BTBD18	B2RXH4	712 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	STMND1	H3BQB6	276 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	SPRY3	O43610	288 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	LARGE1	O95461	756 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	PPP1R3D	O95685	299 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	PPM1A	P35813	382 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	STAT1	P42224	750 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	RASSF2	P50749	326 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	COASY	Q13057	564 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	SPARCL1	Q14515	664 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	LCE1F	Q5T754	118 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	SPSB3	Q6PJ21	355 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	ZNF367	Q7RTV3	350 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	ARMC9	Q7Z3E5	817 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	IGFN1	Q86VF2	1251 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	CAMK1D	Q8IU85	385 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	BRD8	Q9H0E9	1235 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	HIPK3	Q9H422	1215 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	LIN7C	Q9NUP9	197 aa	Known RBP	3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	KCNG2	Q9UJ96	466 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	PKP3	Q9Y446	797 aa		3.54	□□□□□ -1.84
CCNL1-223	ENST00000481173	CLEC18A	A5D8T8	446 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	LGALS16	A8MUM7	142 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	LIAS	O43766	372 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	HEXIM1	O94992	359 aa	Known RBP	3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	MYL1	P05976	194 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	CHRNB2	P17787	502 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	PRPH2	P23942	346 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	HOXD3	P31249	432 aa	Predicted RBP	3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	CYP2J2	P51589	502 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173		Q0VFX4	171 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	MRGPRG-AS1	Q2M3A8	158 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	ZNF718	Q3SXZ3	478 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	OTUD1	Q5VV17	481 aa	Predicted RBP	3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	C9orf57	Q5W0N0	161 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	MTFR2	Q6P444	385 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	TMEM71	Q6P5X7	295 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173		Q6ZSV7	163 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	C16orf82	Q7Z2V1	217 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	RNF144B	Q7Z419	303 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	VPS52	Q8N1B4	723 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	CLEC18C	Q8NCF0	446 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	ADAMTS14	Q8WXS8	1223 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	KCNJ9	Q92806	393 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	TMEM41A	Q96HV5	264 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	CCDC136	Q96JN2	1154 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	RNF146	Q9NTX7	359 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	GEMIN8	Q9NWZ8	242 aa	Known RBP	3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	SLC25A13	Q9UJS0	675 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	FZD10	Q9ULW2	581 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	RAP2C	Q9Y3L5	183 aa		3.53	□□□□□ -1.84
CCNL1-223	ENST00000481173	SERINC4	A6NH21	518 aa		3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	MBD3L5	A6NJ08	208 aa	Predicted RBP	3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	GRM8	O00222	908 aa		3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	PRC1	O43663	620 aa		3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	ZBTB11	O95625	1053 aa	Predicted RBP	3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	UMOD	P07911	640 aa		3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	LYL1	P12980	280 aa		3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	HOXB9	P17482	250 aa	Predicted RBP	3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	EEF1A2	Q05639	463 aa	Known RBP	3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	CDK18	Q07002	472 aa		3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	PTK2B	Q14289	1009 aa		3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	LRRC24	Q50LG9	513 aa		3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	DNTTIP2	Q5QJE6	756 aa	Known RBP	3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	ATPAF1	Q5TC12	328 aa	Predicted RBP	3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	FAM171A1	Q5VUB5	890 aa		3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	XRRA1	Q6P2D8	792 aa		3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	DPP10	Q8N608	796 aa		3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	HORMAD2	Q8N7B1	307 aa		3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	FAM71B	Q8TC56	605 aa		3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	APOLD1	Q96LR9	279 aa		3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	ACTR5	Q9H9F9	607 aa	Predicted RBP	3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	PDE11A	Q9HCR9	933 aa		3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	ARFGAP3	Q9NP61	516 aa		3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	TMEM248	Q9NWD8	314 aa		3.52	□□□□□ -1.85
CCNL1-223	ENST00000481173	CDH22	Q9UJ99	828 aa		3.52	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms