RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 ATP11CQ8NB49 1132 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 RLN3Q8WXF3 142 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 HMCESQ96FZ2 354 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 CSPG4P5Q96PW8 444 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 ACE2Q9BYF1 805 aaPredicted RBP20.83■□□□□ 0.93
CTSA-206ENST00000480961 FAM126AQ9BYI3 521 aaPredicted RBP20.83■□□□□ 0.93
CTSA-206ENST00000480961 MKRN2Q9H000 416 aaKnown RBP20.83■□□□□ 0.93
CTSA-206ENST00000480961 IRF2BPLQ9H1B7 796 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 RETREG1Q9H6L5 497 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 ETNK2Q9NVF9 386 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 EBF1Q9UH73 591 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 PCDHGA2Q9Y5H1 932 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 ALG6Q9Y672 507 aa20.83■□□□□ 0.93
CTSA-206ENST00000480961 A0A0A6YYK5 440 aaPredicted RBP20.82■□□□□ 0.92
CTSA-206ENST00000480961 RASA4BC9J798 803 aa20.82■□□□□ 0.92
CTSA-206ENST00000480961 DCLK1O15075 740 aa20.82■□□□□ 0.92
CTSA-206ENST00000480961 ZBTB24O43167 697 aaPredicted RBP20.82■□□□□ 0.92
CTSA-206ENST00000480961 RASA4O43374 803 aa20.82■□□□□ 0.92
CTSA-206ENST00000480961 SMAD6O43541 496 aaKnown RBP20.82■□□□□ 0.92
CTSA-206ENST00000480961 SPOPO43791 374 aa20.82■□□□□ 0.92
CTSA-206ENST00000480961 IL4RP24394 825 aa20.82■□□□□ 0.92
CTSA-206ENST00000480961 NNMTP40261 264 aa20.82■□□□□ 0.92
CTSA-206ENST00000480961 HCAR3P49019 387 aa20.82■□□□□ 0.92
CTSA-206ENST00000480961 ARSEP51690 589 aa20.82■□□□□ 0.92
CTSA-206ENST00000480961 HADHBP55084 474 aaKnown RBP20.82■□□□□ 0.92
CTSA-206ENST00000480961 CAMK2GQ13555 558 aaPredicted RBP20.82■□□□□ 0.92
CTSA-206ENST00000480961 DLG2Q15700 870 aa20.82■□□□□ 0.92
CTSA-206ENST00000480961 HNRNPA1L2Q32P51 320 aaKnown RBP20.82■□□□□ 0.92
CTSA-206ENST00000480961 KIAA1324Q6UXG2 1013 aaKnown RBP20.82■□□□□ 0.92
CTSA-206ENST00000480961 TP53INP2Q8IXH6 220 aa20.82■□□□□ 0.92
CTSA-206ENST00000480961 FRMD1Q8N878 549 aa20.82■□□□□ 0.92
CTSA-206ENST00000480961 TPCN2Q8NHX9 752 aa20.82■□□□□ 0.92
CTSA-206ENST00000480961 RAPGEF5Q92565 580 aa20.82■□□□□ 0.92
CTSA-206ENST00000480961 MRGPRX1Q96LB2 322 aa20.82■□□□□ 0.92
CTSA-206ENST00000480961 CALN1Q9BXU9 219 aa20.82■□□□□ 0.92
CTSA-206ENST00000480961 MAGEH1Q9H213 219 aa20.82■□□□□ 0.92
CTSA-206ENST00000480961 SUN2Q9UH99 717 aa20.82■□□□□ 0.92
CTSA-206ENST00000480961 PJA2O43164 708 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 BNIP3LO60238 219 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 KRT7P08729 469 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 SRCP12931 536 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 COPAP53621 1224 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 ARF5P84085 180 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 DPYSL3Q14195 570 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 C9orf64Q5T6V5 341 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 TMPRSS6Q8IU80 811 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 UMODL1-AS1Q8N2C9 162 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 SH2D3CQ8N5H7 860 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 NPWQ8N729 165 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 KDM1BQ8NB78 822 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 FRS2Q8WU20 508 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 TSC1Q92574 1164 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 SLC39A8Q9C0K1 460 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 PRDM16Q9HAZ2 1276 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 CD93Q9NPY3 652 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 ADGRG1Q9Y653 693 aa20.81■□□□□ 0.92
CTSA-206ENST00000480961 MACROD2A1Z1Q3 448 aa20.8■□□□□ 0.92
CTSA-206ENST00000480961 ATP9BO43861 1147 aa20.8■□□□□ 0.92
CTSA-206ENST00000480961 LILRB5O75023 590 aa20.8■□□□□ 0.92
CTSA-206ENST00000480961 SLC1A1P43005 524 aa20.8■□□□□ 0.92
CTSA-206ENST00000480961 PAPOLAP51003 745 aaKnown RBP20.8■□□□□ 0.92
CTSA-206ENST00000480961 CCZ1BP86790 482 aa20.8■□□□□ 0.92
CTSA-206ENST00000480961 CCZ1P86791 482 aaPredicted RBP20.8■□□□□ 0.92
CTSA-206ENST00000480961 KIF5AQ12840 1032 aa20.8■□□□□ 0.92
CTSA-206ENST00000480961 GSE1Q14687 1217 aa20.8■□□□□ 0.92
CTSA-206ENST00000480961 LPAL2Q16609 132 aa20.8■□□□□ 0.92
CTSA-206ENST00000480961 Q6ZVU0 165 aa20.8■□□□□ 0.92
CTSA-206ENST00000480961 DAAM2Q86T65 1068 aa20.8■□□□□ 0.92
CTSA-206ENST00000480961 STK40Q8N2I9 435 aa20.8■□□□□ 0.92
CTSA-206ENST00000480961 FAM160A2Q8N612 972 aaPredicted RBP20.8■□□□□ 0.92
CTSA-206ENST00000480961 CCDC112Q8NEF3 446 aa20.8■□□□□ 0.92
CTSA-206ENST00000480961 OR2T3Q8NH03 318 aa20.8■□□□□ 0.92
CTSA-206ENST00000480961 FAM71BQ8TC56 605 aa20.8■□□□□ 0.92
CTSA-206ENST00000480961 PTPRN2Q92932 1015 aa20.8■□□□□ 0.92
CTSA-206ENST00000480961 TNKS2Q9H2K2 1166 aa20.8■□□□□ 0.92
CTSA-206ENST00000480961 LRRC19Q9H756 370 aa20.8■□□□□ 0.92
CTSA-206ENST00000480961 MYO18AQ92614 2054 aaKnown RBP20.79■□□□□ 0.92
CTSA-206ENST00000480961 CCDC163A0A0D9SF12 145 aa20.79■□□□□ 0.92
CTSA-206ENST00000480961 EDDM13A0A1B0GTR0 161 aa20.79■□□□□ 0.92
CTSA-206ENST00000480961 DFFAO00273 331 aa20.79■□□□□ 0.92
CTSA-206ENST00000480961 ARHGAP6O43182 974 aa20.79■□□□□ 0.92
CTSA-206ENST00000480961 KDELR3O43731 214 aa20.79■□□□□ 0.92
CTSA-206ENST00000480961 CD160O95971 181 aa20.79■□□□□ 0.92
CTSA-206ENST00000480961 KRT1P04264 644 aa20.79■□□□□ 0.92
CTSA-206ENST00000480961 ETFBP38117 255 aa20.79■□□□□ 0.92
CTSA-206ENST00000480961 ZNF135P52742 658 aaPredicted RBP20.79■□□□□ 0.92
CTSA-206ENST00000480961 NDST2P52849 883 aa20.79■□□□□ 0.92
CTSA-206ENST00000480961 PARP15Q460N3 678 aa20.79■□□□□ 0.92
CTSA-206ENST00000480961 RETSATQ6NUM9 610 aa20.79■□□□□ 0.92
CTSA-206ENST00000480961 ZC3H14Q6PJT7 736 aaKnown RBP20.79■□□□□ 0.92
CTSA-206ENST00000480961 ARHGAP12Q8IWW6 846 aa20.79■□□□□ 0.92
CTSA-206ENST00000480961 RHOT1Q8IXI2 618 aa20.79■□□□□ 0.92
CTSA-206ENST00000480961 PCDH19Q8TAB3 1148 aa20.79■□□□□ 0.92
CTSA-206ENST00000480961 SIPA1Q96FS4 1042 aa20.79■□□□□ 0.92
CTSA-206ENST00000480961 HPCAL4Q9UM19 191 aa20.79■□□□□ 0.92
CTSA-206ENST00000480961 HS3ST2Q9Y278 367 aa20.79■□□□□ 0.92
CTSA-206ENST00000480961 FCF1Q9Y324 198 aaKnown RBP20.79■□□□□ 0.92
CTSA-206ENST00000480961 TARSL2A2RTX5 802 aaKnown RBP20.78■□□□□ 0.92
CTSA-206ENST00000480961 LRRD1A4D1F6 860 aa20.78■□□□□ 0.92
CTSA-206ENST00000480961 BTNL10A8MVZ5 291 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms