RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 IFT81Q8WYA0 676 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 SEC14L1Q92503 715 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 RUBCNQ92622 972 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 ELSPBP1Q96BH3 223 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 FAM83CQ9BQN1 747 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 MUC3BQ9H195 1237 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 SP110Q9HB58 689 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 FAM114A2Q9NRY5 505 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 MARK1Q9P0L2 795 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 EPS15L1Q9UBC2 864 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 DOCK8Q8NF50 2099 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 A0A0A0MRY4 1105 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 KDELR3O43731 214 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 ECI2O75521 394 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 JCHAINP01591 159 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 CYP17A1P05093 508 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 TUBBP07437 444 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 CCNB1P14635 433 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 TYRP14679 529 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 ARSAP15289 507 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 SP100P23497 879 aaPredicted RBP17.96■□□□□ 0.47
UPF3A-206ENST00000480362 PTPN3P26045 913 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 ETFBP38117 255 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 CSKP41240 450 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 VSNL1P62760 191 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 FCHO2Q0JRZ9 810 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 GRM2Q14416 872 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 PDGFRLQ15198 375 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 WDR93Q6P2C0 686 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 MTSS1LQ765P7 747 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 PID1Q7Z2X4 250 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 YAF2Q8IY57 180 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 ZNF567Q8N184 647 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 TAB3Q8N5C8 712 aaPredicted RBP17.96■□□□□ 0.47
UPF3A-206ENST00000480362 USP33Q8TEY7 942 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 FGF14Q92915 247 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 LRRC45Q96CN5 670 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 SNF8Q96H20 258 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 SPATA13Q96N96 652 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 FEM1AQ9BSK4 669 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 ACE2Q9BYF1 805 aaPredicted RBP17.96■□□□□ 0.47
UPF3A-206ENST00000480362 CEP41Q9BYV8 373 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 EBF3Q9H4W6 596 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 ATP13A1Q9HD20 1204 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 KIAA1522Q9P206 1035 aaPredicted RBP17.96■□□□□ 0.47
UPF3A-206ENST00000480362 PAK5Q9P286 719 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 RAB21Q9UL25 225 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 OR51B4Q9Y5P0 310 aa17.96■□□□□ 0.47
UPF3A-206ENST00000480362 PRAMEF11O60813 436 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 NFATC1O95644 943 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 PSMC3P17980 439 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 MCM3P25205 808 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 CARSP49589 748 aaKnown RBP17.95■□□□□ 0.46
UPF3A-206ENST00000480362 OXCT1P55809 520 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 IFI35P80217 286 aaPredicted RBP17.95■□□□□ 0.46
UPF3A-206ENST00000480362 GAD2Q05329 585 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 LMAN2Q12907 356 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 ZBTB17Q13105 803 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 TEX44Q53QW1 395 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 C4orf22Q6V702 233 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 CCNI2Q6ZMN8 369 aaPredicted RBP17.95■□□□□ 0.46
UPF3A-206ENST00000480362 LEKR1Q6ZMV7 388 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 ARHGEF18Q6ZSZ5 1173 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 ATP2A3Q93084 1043 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 HLA-CQ95604 372 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 FATE1Q969F0 183 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 ALG14Q96F25 216 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 VAT1Q99536 393 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 RPP25Q9BUL9 199 aaKnown RBP17.95■□□□□ 0.46
UPF3A-206ENST00000480362 GRHL1Q9NZI5 618 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 WHRNQ9P202 907 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 KLHL8Q9P2G9 620 aaPredicted RBP17.95■□□□□ 0.46
UPF3A-206ENST00000480362 HPCAL4Q9UM19 191 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 SHROOM3Q8TF72 1996 aa17.95■□□□□ 0.46
UPF3A-206ENST00000480362 CDH23Q9H251 3354 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 DNALI1O14645 258 aaPredicted RBP17.94■□□□□ 0.46
UPF3A-206ENST00000480362 PEX11BO96011 259 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 ADH1CP00326 375 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 ADH5P11766 374 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 ITIH2P19823 946 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 GLDCP23378 1020 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 CD70P32970 193 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 CALCOCO2Q13137 446 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 CUL1Q13616 776 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 IZUMO3Q5VZ72 239 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 APCDD1Q8J025 514 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 NAT16Q8N8M0 369 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 NSMCE1Q8WV22 266 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 MAML1Q92585 1016 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 LMLNQ96KR4 655 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 AGAP3Q96P47 875 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 IL12RB2Q99665 862 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 ECT2Q9H8V3 914 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 PDFQ9HBH1 243 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 HPS4Q9NQG7 708 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 RBM22Q9NW64 420 aaKnown RBP eCLIP17.94■□□□□ 0.462e-10■■■■■ 44.4
UPF3A-206ENST00000480362 VPS28Q9UK41 221 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 TRHDEQ9UKU6 1024 aa17.94■□□□□ 0.46
UPF3A-206ENST00000480362 TPX2Q9ULW0 747 aaKnown RBP17.94■□□□□ 0.46
UPF3A-206ENST00000480362 CHD5Q8TDI0 1954 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms