RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 SH3RF3Q8TEJ3 882 aaPredicted RBP6.55□□□□□ -1.36
PBRM1-220ENST00000480064 GLMPQ8WWB7 406 aa6.55□□□□□ -1.36
PBRM1-220ENST00000480064 TRMT61AQ96FX7 289 aaKnown RBP6.55□□□□□ -1.36
PBRM1-220ENST00000480064 MAP7D2Q96T17 732 aa6.55□□□□□ -1.36
PBRM1-220ENST00000480064 NPAS1Q99742 590 aa6.55□□□□□ -1.36
PBRM1-220ENST00000480064 CINPQ9BW66 212 aaPredicted RBP6.55□□□□□ -1.36
PBRM1-220ENST00000480064 ACTRT3Q9BYD9 372 aa6.55□□□□□ -1.36
PBRM1-220ENST00000480064 DECR2Q9NUI1 292 aa6.55□□□□□ -1.36
PBRM1-220ENST00000480064 SPATS2LQ9NUQ6 558 aaKnown RBP6.55□□□□□ -1.36
PBRM1-220ENST00000480064 VSX1Q9NZR4 365 aaPredicted RBP6.55□□□□□ -1.36
PBRM1-220ENST00000480064 SELENONQ9NZV5 590 aa6.55□□□□□ -1.36
PBRM1-220ENST00000480064 ADAM18Q9Y3Q7 739 aa6.55□□□□□ -1.36
PBRM1-220ENST00000480064 ADGRF5Q8IZF2 1346 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 CEP104O60308 925 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 TACC1O75410 805 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 IPO7O95373 1038 aaKnown RBP6.54□□□□□ -1.36
PBRM1-220ENST00000480064 KRT10P13645 584 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 FDPSP14324 419 aaKnown RBP6.54□□□□□ -1.36
PBRM1-220ENST00000480064 CR2P20023 1033 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 CPT2P23786 658 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 GSTM2P28161 218 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 MCM7P33993 719 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 CLCN2P51788 898 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 FOXL2P58012 376 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 NIPAL4Q0D2K0 466 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 ABHD18Q0P651 414 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 CSTF3Q12996 717 aaKnown RBP6.54□□□□□ -1.36
PBRM1-220ENST00000480064 E2F5Q15329 346 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 ZNF674Q2M3X9 581 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 AP5B1Q2VPB7 878 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 TEDDM1Q5T9Z0 273 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 HMBOX1Q6NT76 420 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 DENND5BQ6ZUT9 1274 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 USP51Q70EK9 711 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 RTL10Q7L3V2 364 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 TMPRSS9Q7Z410 1059 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 GALNT7Q86SF2 657 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 TADA2BQ86TJ2 420 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 LMNTD2Q8IXW0 634 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 GPR135Q8IZ08 494 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 VPS52Q8N1B4 723 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 PLD5Q8N7P1 536 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 SRFBP1Q8NEF9 429 aaKnown RBP6.54□□□□□ -1.36
PBRM1-220ENST00000480064 MDGA1Q8NFP4 955 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 FAM162AQ96A26 154 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 WDFY2Q96P53 400 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 DCLRE1CQ96SD1 692 aaKnown RBP6.54□□□□□ -1.36
PBRM1-220ENST00000480064 XPO4Q9C0E2 1151 aaKnown RBP6.54□□□□□ -1.36
PBRM1-220ENST00000480064 CDCP1Q9H5V8 836 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 AGO3Q9H9G7 860 aaKnown RBP6.54□□□□□ -1.36
PBRM1-220ENST00000480064 COPS7BQ9H9Q2 264 aaPredicted RBP6.54□□□□□ -1.36
PBRM1-220ENST00000480064 LTB4R2Q9NPC1 389 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 C5AR2Q9P296 337 aa6.54□□□□□ -1.36
PBRM1-220ENST00000480064 HECAQ9UBI9 543 aaPredicted RBP6.54□□□□□ -1.36
PBRM1-220ENST00000480064 CNOT11Q9UKZ1 510 aaKnown RBP6.54□□□□□ -1.36
PBRM1-220ENST00000480064 PTRH2Q9Y3E5 179 aaKnown RBP6.54□□□□□ -1.36
PBRM1-220ENST00000480064 A0A1W2PQM1 296 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 ARHGEF37A1IGU5 675 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 BTBD18B2RXH4 712 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 C19orf81C9J6K1 198 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 TRIM24O15164 1050 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 CA12O43570 354 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 STRNO43815 780 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 PAGE4O60829 102 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 GOSR1O95249 250 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 GALTP07902 379 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 CREB1P16220 341 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 TLX1P31314 330 aaPredicted RBP6.53□□□□□ -1.36
PBRM1-220ENST00000480064 LIPAP38571 399 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 RPS19P39019 145 aaKnown RBP6.53□□□□□ -1.36
PBRM1-220ENST00000480064 OAZ1P54368 228 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 CEBPZQ03701 1054 aaKnown RBP6.53□□□□□ -1.36
PBRM1-220ENST00000480064 OCA2Q04671 838 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 AP1B1Q10567 949 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 IL13RA2Q14627 380 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 SLMAPQ14BN4 828 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 C15orf59Q2T9L4 293 aaPredicted RBP6.53□□□□□ -1.36
PBRM1-220ENST00000480064 ZSCAN23Q3MJ62 389 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 ZNF805Q5CZA5 627 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 DENND2CQ68D51 928 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 MTFR2Q6P444 385 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 GJB7Q6PEY0 223 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 TMPRSS6Q8IU80 811 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 BRSK2Q8IWQ3 736 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 FAM109AQ8N4B1 249 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 MOSPD2Q8NHP6 518 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 ADAMTS17Q8TE56 1095 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 MRPS27Q92552 414 aaKnown RBP6.53□□□□□ -1.36
PBRM1-220ENST00000480064 GLG1Q92896 1179 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 GTF3C6Q969F1 213 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 STRA6Q9BX79 667 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 OPA3Q9H6K4 179 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 POLR1BQ9H9Y6 1135 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 TRPV4Q9HBA0 871 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 C20orf141Q9NUB4 165 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 WDR35Q9P2L0 1181 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 EIF2B4Q9UI10 523 aaKnown RBP6.53□□□□□ -1.36
PBRM1-220ENST00000480064 KCNE5Q9UJ90 142 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 VPS4AQ9UN37 437 aa6.53□□□□□ -1.36
PBRM1-220ENST00000480064 POMT1Q9Y6A1 747 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms