RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 GANCQ8TET4 914 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 SYN2Q92777 582 aaPredicted RBP16.09■□□□□ 0.17
HDLBP-238ENST00000479894 CYFIP2Q96F07 1278 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 VCPIP1Q96JH7 1222 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 ZNHIT6Q9NWK9 470 aaKnown RBP16.09■□□□□ 0.17
HDLBP-238ENST00000479894 RASAL2Q9UJF2 1139 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 CEP83Q9Y592 693 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 BZW2Q9Y6E2 419 aaKnown RBP16.09■□□□□ 0.17
HDLBP-238ENST00000479894 KIF26BQ2KJY2 2108 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 FOXN3O00409 490 aaPredicted RBP16.08■□□□□ 0.16
HDLBP-238ENST00000479894 WNT9AO14904 365 aa16.08■□□□□ 0.16
HDLBP-238ENST00000479894 USP12O75317 370 aa16.08■□□□□ 0.16
HDLBP-238ENST00000479894 ZNF75DP51815 510 aa16.08■□□□□ 0.16
HDLBP-238ENST00000479894 KIF11P52732 1056 aa16.08■□□□□ 0.16
HDLBP-238ENST00000479894 OVGP1Q12889 678 aa16.08■□□□□ 0.16
HDLBP-238ENST00000479894 CNGA2Q16280 664 aa16.08■□□□□ 0.16
HDLBP-238ENST00000479894 ZNF394Q53GI3 561 aa16.08■□□□□ 0.16
HDLBP-238ENST00000479894 DPY19L2P1Q6NXN4 242 aa16.08■□□□□ 0.16
HDLBP-238ENST00000479894 SERAC1Q96JX3 654 aa16.08■□□□□ 0.16
HDLBP-238ENST00000479894 TRIM4Q9C037 500 aa16.08■□□□□ 0.16
HDLBP-238ENST00000479894 NEUROG2Q9H2A3 272 aa16.08■□□□□ 0.16
HDLBP-238ENST00000479894 NLRC4Q9NPP4 1024 aa16.08■□□□□ 0.16
HDLBP-238ENST00000479894 ANKMY1Q9P2S6 941 aa16.08■□□□□ 0.16
HDLBP-238ENST00000479894 GGA2Q9UJY4 613 aa16.08■□□□□ 0.16
HDLBP-238ENST00000479894 STRIP2Q9ULQ0 834 aa16.08■□□□□ 0.16
HDLBP-238ENST00000479894 CAPN11Q9UMQ6 739 aa16.08■□□□□ 0.16
HDLBP-238ENST00000479894 USP3Q9Y6I4 520 aa16.08■□□□□ 0.16
HDLBP-238ENST00000479894 MYO9AB2RTY4 2548 aa16.08■□□□□ 0.16
HDLBP-238ENST00000479894 COL27A1Q8IZC6 1860 aaPredicted RBP16.08■□□□□ 0.16
HDLBP-238ENST00000479894 BSNQ9UPA5 3926 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 SIGLEC6O43699 453 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 OPA1O60313 960 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 PABPC1P11940 636 aaKnown RBP16.07■□□□□ 0.16
HDLBP-238ENST00000479894 CDC25BP30305 580 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 GNA15P30679 374 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 KRT9P35527 623 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 JAM2P57087 298 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 DAB2P98082 770 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 PPP1R2P3Q6NXS1 205 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 GJB7Q6PEY0 223 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 CCDC81Q6ZN84 652 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 VPS36Q86VN1 386 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 CNGA4Q8IV77 575 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 DRC7Q8IY82 874 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 KAT5Q92993 513 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 ELMO3Q96BJ8 720 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 PLD4Q96BZ4 506 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 GRAMD1AQ96CP6 724 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 NOX5Q96PH1 765 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 UBXN6Q9BZV1 441 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 PDCL3Q9H2J4 239 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 GRPEL1Q9HAV7 217 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 FAM49BQ9NUQ9 324 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 TJP2Q9UDY2 1190 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 SERGEFQ9UGK8 458 aa16.07■□□□□ 0.16
HDLBP-238ENST00000479894 A0A1W2PP55 124 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 LATO43561 262 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 GP1BAP07359 652 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 HMBSP08397 361 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 SETSIPP0DME0 302 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 NUDT1P36639 197 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 KLK7P49862 253 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 EFEMP1Q12805 493 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 CST6Q15828 149 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 HS1BP3Q53T59 392 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 MBLAC2Q68D91 279 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 NAPEPLDQ6IQ20 393 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 LCLAT1Q6UWP7 414 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 SPATS2Q86XZ4 545 aaKnown RBP16.06■□□□□ 0.16
HDLBP-238ENST00000479894 C12orf29Q8N999 325 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 ANKRD52Q8NB46 1076 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 OR4C6Q8NH72 309 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 MIS12Q9H081 205 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 STARD5Q9NSY2 213 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 ABCB8Q9NUT2 735 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 AIPL1Q9NZN9 384 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 MARCH2Q9P0N8 246 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 STOML2Q9UJZ1 356 aa16.06■□□□□ 0.16
HDLBP-238ENST00000479894 TRIM38O00635 465 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 MID1O15344 667 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 THAP12O43422 761 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 CSO75390 466 aaKnown RBP16.05■□□□□ 0.16
HDLBP-238ENST00000479894 CKMT1AP12532 417 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 GP1BBP13224 206 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 KRT10P13645 584 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 POLR2EP19388 210 aaKnown RBP16.05■□□□□ 0.16
HDLBP-238ENST00000479894 ADORA2BP29275 332 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 RBMS1P29558 406 aaKnown RBP16.05■□□□□ 0.16
HDLBP-238ENST00000479894 APBA1Q02410 837 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 GSE1Q14687 1217 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 ARID5BQ14865 1188 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 TRIP4Q15650 581 aaPredicted RBP16.05■□□□□ 0.16
HDLBP-238ENST00000479894 ARL13BQ3SXY8 428 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 C6orf132Q5T0Z8 1188 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 TRIM72Q6ZMU5 477 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 ARHGAP18Q8N392 663 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 ZNF557Q8N988 423 aaPredicted RBP16.05■□□□□ 0.16
HDLBP-238ENST00000479894 EXD3Q8N9H8 876 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 MSANTD4Q8NCY6 345 aa16.05■□□□□ 0.16
HDLBP-238ENST00000479894 OR8K1Q8NGG5 319 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms