RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 IRAK2O43187 625 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 NRDCO43847 1150 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 MOCS3O95396 460 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 LDOC1O95751 146 aaPredicted RBP6.87□□□□□ -1.31
VCP-205ENST00000479300 APOEP02649 317 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 LTFP02788 710 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 ATP5BP06576 529 aaKnown RBP6.87□□□□□ -1.31
VCP-205ENST00000479300 POLR2EP19388 210 aaKnown RBP6.87□□□□□ -1.31
VCP-205ENST00000479300 EPHA8P29322 1005 aaPredicted RBP6.87□□□□□ -1.31
VCP-205ENST00000479300 CD70P32970 193 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 GALCP54803 685 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 MARSP56192 900 aaKnown RBP6.87□□□□□ -1.31
VCP-205ENST00000479300 DAOAP59103 153 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 RACK1P63244 317 aaKnown RBP6.87□□□□□ -1.31
VCP-205ENST00000479300 CXADRP78310 365 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 CCZ1BP86790 482 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 CCZ1P86791 482 aaPredicted RBP6.87□□□□□ -1.31
VCP-205ENST00000479300 INSM1Q01101 510 aaPredicted RBP6.87□□□□□ -1.31
VCP-205ENST00000479300 SFSWAPQ12872 951 aaKnown RBP6.87□□□□□ -1.31
VCP-205ENST00000479300 BNIP3Q12983 259 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 TRIP4Q15650 581 aaPredicted RBP6.87□□□□□ -1.31
VCP-205ENST00000479300 CAMK4Q16566 473 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 TBC1D25Q3MII6 688 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 ANO6Q4KMQ2 910 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 C6orf118Q5T5N4 469 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 ADGRF1Q5T601 910 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 SFMBT2Q5VUG0 894 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 KIAA0895LQ68EN5 471 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 NCEH1Q6PIU2 408 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 LRRC69Q6ZNQ3 347 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 MMS22LQ6ZRQ5 1243 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 SPATS2Q86XZ4 545 aaKnown RBP6.87□□□□□ -1.31
VCP-205ENST00000479300 TRIM59Q8IWR1 403 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.87□□□□□ -1.31
VCP-205ENST00000479300 DCBLD1Q8N8Z6 715 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 MLKLQ8NB16 471 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 RFFLQ8WZ73 363 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 FGF11Q92914 225 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 RNF34Q969K3 372 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 MYEOVQ96EZ4 313 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 HIC2Q96JB3 615 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 SERPINB11Q96P15 392 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 NOX5Q96PH1 765 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 MED15Q96RN5 788 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 BTBD1Q9H0C5 482 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 CLSTN2Q9H4D0 955 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 CPNE5Q9HCH3 593 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 ABCB8Q9NUT2 735 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 KIAA1468Q9P260 1216 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 SUN2Q9UH99 717 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 SFMBT1Q9UHJ3 866 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 PCDHB1Q9Y5F3 818 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 AK5Q9Y6K8 562 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 COL27A1Q8IZC6 1860 aaPredicted RBP6.87□□□□□ -1.31
VCP-205ENST00000479300 BOD1L1Q8NFC6 3051 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 NYNRINQ9P2P1 1898 aaKnown RBP6.86□□□□□ -1.31
VCP-205ENST00000479300 RRP8O43159 456 aaKnown RBP6.86□□□□□ -1.31
VCP-205ENST00000479300 ACSL4O60488 711 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 TBL1XO60907 577 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 RNASEH1O60930 286 aaKnown RBP6.86□□□□□ -1.31
VCP-205ENST00000479300 C1SP09871 688 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 SKILP12757 684 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 CALRP27797 417 aaKnown RBP6.86□□□□□ -1.31
VCP-205ENST00000479300 GNA15P30679 374 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 KRT9P35527 623 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 HNF1BP35680 557 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 METAP1P53582 386 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 CORO7P57737 925 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 BPIFB4P59827 614 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 PTK2Q05397 1052 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 ZBTB16Q05516 673 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 LY6DQ14210 128 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 ARHGAP44Q17R89 818 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 EXOC3L4Q17RC7 722 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 ERCC6LQ2NKX8 1250 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 CT47A1Q5JQC4 288 aaPredicted RBP6.86□□□□□ -1.31
VCP-205ENST00000479300 RNF219Q5W0B1 726 aaPredicted RBP6.86□□□□□ -1.31
VCP-205ENST00000479300 MBLAC2Q68D91 279 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 PMF1Q6P1K2 205 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 MSANTD2Q6P1R3 559 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 CHST9Q7L1S5 443 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 LUZP1Q86V48 1076 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 ARHGEF19Q8IW93 802 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 REXO1L1PQ8IX06 675 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 AHI1Q8N157 1196 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 UBR7Q8N806 425 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 ATP6V0D2Q8N8Y2 350 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 HJURPQ8NCD3 748 aaPredicted RBP6.86□□□□□ -1.31
VCP-205ENST00000479300 SLC35F5Q8WV83 523 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 TFAP2BQ92481 460 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 UBXN4Q92575 508 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 TTC9Q92623 222 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 MRGPRX3Q96LB0 322 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 ACE2Q9BYF1 805 aaPredicted RBP6.86□□□□□ -1.31
VCP-205ENST00000479300 RSPH9Q9H1X1 276 aaPredicted RBP6.86□□□□□ -1.31
VCP-205ENST00000479300 NEUROG2Q9H2A3 272 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 PABPC3Q9H361 631 aaKnown RBP6.86□□□□□ -1.31
VCP-205ENST00000479300 CXorf56Q9H5V9 222 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 SYNCQ9H7C4 482 aa6.86□□□□□ -1.31
VCP-205ENST00000479300 FBRSQ9HAH7 460 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms