RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 STRNO43815 780 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 TMEM191BP0C7N4 346 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 KLRC2P26717 231 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 ME1P48163 572 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 MVDP53602 400 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 ARHGAP8P85298 464 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 GAD2Q05329 585 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 BYSLQ13895 437 aaKnown RBP4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 PIK3CD-AS1Q5SR53 167 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 MAP3K21Q5TCX8 1036 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 ZNF425Q6IV72 752 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 C11orf87Q6NUJ2 197 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 CCDC25Q86WR0 208 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 ARFGAP1Q8N6T3 406 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 HERVK_113Q902F9 699 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 SMG7Q92540 1137 aaKnown RBP4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 USP13Q92995 863 aaPredicted RBP4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 ZNF419Q96HQ0 510 aaPredicted RBP4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 REEP2Q9BRK0 252 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 WDR83Q9BRX9 315 aaKnown RBP4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 IFT27Q9BW83 186 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 ZNF304Q9HCX3 659 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 TLR8Q9NR97 1041 aaKnown RBP4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 ELOVL5Q9NYP7 299 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 CD207Q9UJ71 328 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 COG5Q9UP83 839 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 DHDHQ9UQ10 334 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 LAS1LQ9Y4W2 734 aaKnown RBP4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 AFG3L2Q9Y4W6 797 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 HS3ST3B1Q9Y662 390 aa4.28□□□□□ -1.72
SMARCA1-204ENST00000478420 CCDC189A1A4V9 331 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 HMGB1P1B2RPK0 211 aaPredicted RBP4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 ZNF814B7Z6K7 855 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 PEX12O00623 359 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 SOCS2O14508 198 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 KLK10O43240 276 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 DHX16O60231 1041 aaKnown RBP4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 ZC3H11AO75152 810 aaKnown RBP eCLIP4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 WEE2P0C1S8 567 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 FCGR2AP12318 317 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 PTGER1P34995 402 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 SKIV2L2P42285 1042 aaKnown RBP4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 ALDH7A1P49419 539 aaKnown RBP4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 SRSF1Q07955 248 aaKnown RBP eCLIP4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 FOXD4Q12950 439 aaPredicted RBP4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 INPP5JQ15735 1006 aaPredicted RBP4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 AP5B1Q2VPB7 878 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 TMEM268Q5VZI3 342 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 HMBOX1Q6NT76 420 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 AAGABQ6PD74 315 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 BBS12Q6ZW61 710 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 C1QL2Q7Z5L3 287 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 PIP4P1Q86T03 277 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 CPOQ8IVL8 374 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 FAM185AQ8N0U4 392 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 SCAIQ8N9R8 606 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 STAMQ92783 540 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 SH3KBP1Q96B97 665 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 RNFT2Q96EX2 444 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 FRG2BQ96QU4 278 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 CTDSP1Q9GZU7 261 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 HIPK3Q9H422 1215 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 STN1Q9H668 368 aaKnown RBP4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 ACTR5Q9H9F9 607 aaPredicted RBP4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 SPAG4Q9NPE6 437 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 DECR2Q9NUI1 292 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 SAGE1Q9NXZ1 904 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 RNF7Q9UBF6 113 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 UPB1Q9UBR1 384 aa4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 LRRFIP2Q9Y608 721 aaKnown RBP4.27□□□□□ -1.73
SMARCA1-204ENST00000478420 ZNF521Q96K83 1311 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 A0A0G2JK05 382 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 A0A0U1RQG5 324 aaPredicted RBP4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 A0A1W2PPC1 479 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 RRN3P2A6NIE6 340 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 NCAM2O15394 837 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 HBP1O60381 514 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 CNTFP26441 200 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 SLC16A2P36021 539 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 GJC1P36383 396 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 TLE2Q04725 743 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 CHRNDQ07001 517 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 TBL3Q12788 808 aaKnown RBP4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 IL13RA2Q14627 380 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 ENTPD8Q5MY95 495 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 MANEAQ5SRI9 462 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 ATG16L1Q676U5 607 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 TTLL5Q6EMB2 1281 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 CLEC4GQ6UXB4 293 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 KDELC2Q7Z4H8 507 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 MMP21Q8N119 569 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 SLC25A41Q8N5S1 370 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 DPP10Q8N608 796 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 HMCESQ96FZ2 354 aa4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 MAELQ96JY0 434 aaKnown RBP4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 NPLQ9BXD5 320 aaPredicted RBP4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 FOXP1Q9H334 677 aaPredicted RBP4.26□□□□□ -1.73
SMARCA1-204ENST00000478420 TASP1Q9H6P5 420 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms