RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 CA4P22748 312 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 CES1P23141 567 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 DNAJB1P25685 340 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 CCT5P48643 541 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 POLD2P49005 469 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 GPR15P49685 360 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 EPHB3P54753 998 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 NRLP54845 237 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 WDR5P61964 334 aaKnown RBP8.1□□□□□ -1.11
VMA21-203ENST00000477649 USP46P62068 366 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 GAD2Q05329 585 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 IL10RBQ08334 325 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 MGAT5Q09328 741 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 PPIGQ13427 754 aaKnown RBP eCLIP8.1□□□□□ -1.11
VMA21-203ENST00000477649 RFTN1Q14699 578 aaPredicted RBP8.1□□□□□ -1.11
VMA21-203ENST00000477649 HP1BP3Q5SSJ5 553 aaPredicted RBP8.1□□□□□ -1.11
VMA21-203ENST00000477649 RASIP1Q5U651 963 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 PIK3R6Q5UE93 754 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 CASC4Q6P4E1 433 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 PRSS55Q6UWB4 352 aaPredicted RBP8.1□□□□□ -1.11
VMA21-203ENST00000477649 RSPO2Q6UXX9 243 aaPredicted RBP8.1□□□□□ -1.11
VMA21-203ENST00000477649 ZNF783Q6ZMS7 281 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 TMEM135Q86UB9 458 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 TAX1BP1Q86VP1 789 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 LCA5Q86VQ0 697 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 TMEM173Q86WV6 379 aaPredicted RBP8.1□□□□□ -1.11
VMA21-203ENST00000477649 IGDCC3Q8IVU1 814 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 CTAGE3PQ8IX95 158 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 TAB3Q8N5C8 712 aaPredicted RBP8.1□□□□□ -1.11
VMA21-203ENST00000477649 PPM1NQ8N819 430 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 DNAAF3Q8N9W5 541 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 ZSCAN18Q8TBC5 510 aaPredicted RBP8.1□□□□□ -1.11
VMA21-203ENST00000477649 MDM1Q8TC05 714 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 DENND1AQ8TEH3 1009 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 MZB1Q8WU39 189 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 BCL7CQ8WUZ0 217 aaPredicted RBP8.1□□□□□ -1.11
VMA21-203ENST00000477649 ATP2A3Q93084 1043 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 CFAP36Q96G28 342 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 CABS1Q96KC9 395 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 ZNF512Q96ME7 567 aaPredicted RBP8.1□□□□□ -1.11
VMA21-203ENST00000477649 PRMT1Q99873 361 aaKnown RBP8.1□□□□□ -1.11
VMA21-203ENST00000477649 CLSTN3Q9BQT9 956 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 PRKD2Q9BZL6 878 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 SLC39A8Q9C0K1 460 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 SLC25A51Q9H1U9 297 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 MAGEH1Q9H213 219 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 RXFP1Q9HBX9 757 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 GLOD4Q9HC38 313 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 IL23AQ9NPF7 189 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 TXNDC16Q9P2K2 825 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 CTNNAL1Q9UBT7 734 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 IPO11Q9UI26 975 aaKnown RBP8.1□□□□□ -1.11
VMA21-203ENST00000477649 RWDD3Q9Y3V2 267 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 FAM169AQ9Y6X4 670 aa8.1□□□□□ -1.11
VMA21-203ENST00000477649 LOC100996750A0A140TA64 210 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 SOBPA7XYQ1 873 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 ACSL4O60488 711 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 AVILO75366 819 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 CLDN11O75508 207 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 KIAA0754O94854 1291 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 ASMTLO95671 621 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 FGF19O95750 216 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 MOCS2O96007 188 aaPredicted RBP8.09□□□□□ -1.11
VMA21-203ENST00000477649 MYCP01106 439 aaPredicted RBP8.09□□□□□ -1.11
VMA21-203ENST00000477649 EPOP01588 193 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 C1QAP02745 245 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 VIMP08670 466 aaKnown RBP8.09□□□□□ -1.11
VMA21-203ENST00000477649 ATF6P18850 670 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 PAMP19021 973 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 NFKB1P19838 968 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 CD68P34810 354 aaPredicted RBP8.09□□□□□ -1.11
VMA21-203ENST00000477649 GP5P40197 560 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 CCNFP41002 786 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 LBX1P52954 281 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 CDH4P55283 916 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 HNRNPH2P55795 449 aaKnown RBP8.09□□□□□ -1.11
VMA21-203ENST00000477649 CRYMQ14894 314 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 PDK4Q16654 411 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 UGP2Q16851 508 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 INSCQ1MX18 579 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 PCID2Q5JVF3 399 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 GRTP1Q5TC63 336 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 MARC1Q5VT66 337 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 HHATQ5VTY9 493 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 SDHAF4Q5VUM1 108 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 TTC19Q6DKK2 380 aaPredicted RBP8.09□□□□□ -1.11
VMA21-203ENST00000477649 FBXL22Q6P050 247 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 CAPN12Q6ZSI9 719 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 CCDC149Q6ZUS6 474 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 CHST9Q7L1S5 443 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 NLRP9Q7RTR0 991 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 TAS1R1Q7RTX1 841 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 PIGWQ7Z7B1 504 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 CHSY1Q86X52 802 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 HERC6Q8IVU3 1022 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 LMNTD2Q8IXW0 634 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 TEX26Q8N6G2 289 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 GBP7Q8N8V2 638 aaPredicted RBP8.09□□□□□ -1.11
VMA21-203ENST00000477649 BANPQ8N9N5 519 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms