RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 CDH16O75309 829 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 WISP3O95389 354 aaPredicted RBP12.38□□□□□ -0.43
PRPF39-203ENST00000477626 MX2P20592 715 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 BASP1P80723 227 aaKnown RBP12.38□□□□□ -0.43
PRPF39-203ENST00000477626 AP1B1Q10567 949 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 TIFABQ6ZNK6 161 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 RGS9BPQ6ZS82 235 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 CROCCP2Q86T23 111 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 KIFC1Q9BW19 673 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 ZNF821O75541 412 aaPredicted RBP12.38□□□□□ -0.43
PRPF39-203ENST00000477626 SPAG6O75602 509 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 CCNB1P14635 433 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 NFKB1P19838 968 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 WEE1P30291 646 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 HOXA9P31269 272 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 GEMIN4P57678 1058 aaKnown RBP12.38□□□□□ -0.43
PRPF39-203ENST00000477626 MARK2Q7KZI7 788 aaKnown RBP12.38□□□□□ -0.43
PRPF39-203ENST00000477626 PDCD7Q8N8D1 485 aaKnown RBP12.38□□□□□ -0.43
PRPF39-203ENST00000477626 ASB3Q9Y575 518 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 RFPL1O75677 317 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 GJB3O75712 270 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 UBE3AQ05086 875 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 DMTNQ08495 405 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 KRT71Q3SY84 523 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 PARP15Q460N3 678 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 CES4AQ5XG92 561 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 FAM109BQ6ICB4 259 aaPredicted RBP12.38□□□□□ -0.43
PRPF39-203ENST00000477626 CGB2Q6NT52 195 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 OTOP3Q7RTS5 596 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 BANPQ8N9N5 519 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 MGME1Q9BQP7 344 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 MRPL17Q9NRX2 175 aaKnown RBP12.38□□□□□ -0.43
PRPF39-203ENST00000477626 SYBUQ9NX95 663 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 VANGL2Q9ULK5 521 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 LRRK1Q38SD2 2015 aa12.38□□□□□ -0.43
PRPF39-203ENST00000477626 MROH6A6NGR9 719 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 SOBPA7XYQ1 873 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 UGT1A9O60656 530 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 ASMTLO95671 621 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 APOEP02649 317 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 APRTP07741 180 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 LSP1P33241 339 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 WDR4P57081 412 aaKnown RBP12.37□□□□□ -0.43
PRPF39-203ENST00000477626 GUCY1A3Q02108 690 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 ACVR1Q04771 509 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 GPS2Q13227 327 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 HNRNPDQ14103 355 aaKnown RBP12.37□□□□□ -0.43
PRPF39-203ENST00000477626 HP1BP3Q5SSJ5 553 aaPredicted RBP12.37□□□□□ -0.43
PRPF39-203ENST00000477626 HECTD3Q5T447 861 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 RAP1GAP2Q684P5 730 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 C3orf62Q6ZUJ4 267 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 HTR3DQ70Z44 454 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 KIAA0907Q7Z7F0 614 aaPredicted RBP12.37□□□□□ -0.43
PRPF39-203ENST00000477626 TTC17Q96AE7 1141 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 ZNF707Q96C28 371 aaPredicted RBP12.37□□□□□ -0.43
PRPF39-203ENST00000477626 UGT1A7Q9HAW7 530 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 UGT1A10Q9HAW8 530 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 UGT1A8Q9HAW9 530 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 GLOD4Q9HC38 313 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 CHMP2BQ9UQN3 213 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 RASA4BC9J798 803 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 RASA4O43374 803 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 ATP5C1P36542 298 aaKnown RBP12.37□□□□□ -0.43
PRPF39-203ENST00000477626 KBTBD12Q3ZCT8 623 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 SYCP2LQ5T4T6 812 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 CCDC25Q86WR0 208 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 CIR1Q86X95 450 aaPredicted RBP12.37□□□□□ -0.43
PRPF39-203ENST00000477626 UNC5BQ8IZJ1 945 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 ATP6V0D2Q8N8Y2 350 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 TMEM169Q96HH4 297 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 RANBP9Q96S59 729 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 A0A1W2PPM1 405 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 IL10RBQ08334 325 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 C10orf120Q5SQS8 335 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 ZFYVE27Q5T4F4 411 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 PPP1R21Q6ZMI0 780 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 VN1R2Q8NFZ6 395 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 SERAC1Q96JX3 654 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 PAFAH2Q99487 392 aa12.37□□□□□ -0.43
PRPF39-203ENST00000477626 URODP06132 367 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 SRGAP2BP0DMP2 458 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 ACVRL1P37023 503 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 CRYMQ14894 314 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 ODF2Q5BJF6 829 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 ZNF783Q6ZMS7 281 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 C7orf61Q8IZ16 206 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 HS6ST3Q8IZP7 471 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 PDIK1LQ8N165 341 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 CPXM2Q8N436 756 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 MDM1Q8TC05 714 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 WFDC5Q8TCV5 224 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 ZNF599Q96NL3 588 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 C17orf80Q9BSJ5 609 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 KIF9Q9HAQ2 790 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 USP34Q70CQ2 3546 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 A0A0D9SEW6 157 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 SLC12A8A0AV02 714 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 C2CD2LO14523 706 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 PIAS1O75925 651 aa12.36□□□□□ -0.43
PRPF39-203ENST00000477626 USP1O94782 785 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms