RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 MUTYHQ9UIF7 546 aa16.55■□□□□ 0.24
VHL-203ENST00000477538 MRFAP1Q9Y605 127 aa16.55■□□□□ 0.24
VHL-203ENST00000477538 H7C0C1 242 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 KRIT1O00522 736 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 KDELR3O43731 214 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 SNAP91O60641 907 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 MAFKO60675 156 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 POLR2EP19388 210 aaKnown RBP16.54■□□□□ 0.24
VHL-203ENST00000477538 GLDCP23378 1020 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 GRIA2P42262 883 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 ATP5OP48047 213 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 CKAP4Q07065 602 aaKnown RBP16.54■□□□□ 0.24
VHL-203ENST00000477538 PPIDQ08752 370 aaKnown RBP16.54■□□□□ 0.24
VHL-203ENST00000477538 XRCC4Q13426 336 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 PON2Q15165 354 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 TMEM215Q68D42 235 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 MBLAC2Q68D91 279 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 NUDT18Q6ZVK8 323 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 PRELID2Q8N945 189 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 CCNYQ8ND76 341 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 LRRN4Q8WUT4 740 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 LGMNQ99538 433 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 BRD8Q9H0E9 1235 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 ARHGEF3Q9NR81 526 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 HOMER3Q9NSC5 361 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 WNT16Q9UBV4 365 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 IPO11Q9UI26 975 aaKnown RBP16.54■□□□□ 0.24
VHL-203ENST00000477538 VPS51Q9UID3 782 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 FBXL21Q9UKT6 434 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 CA14Q9ULX7 337 aa16.54■□□□□ 0.24
VHL-203ENST00000477538 TBC1D3BA6NDS4 549 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 HACD1B0YJ81 288 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 J3KR12 359 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 LIASO43766 372 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 PRAMEF11O60813 436 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 ZMPSTE24O75844 475 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 RBP3P10745 1247 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 SULT2A1Q06520 285 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 IL10RBQ08334 325 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 AP1B1Q10567 949 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 EIF4HQ15056 248 aaKnown RBP16.53■□□□□ 0.24
VHL-203ENST00000477538 CCNG2Q16589 344 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 WHAMMP3Q1A5X7 153 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 SLC45A4Q5BKX6 768 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 TIGD7Q6NT04 549 aaPredicted RBP16.53■□□□□ 0.24
VHL-203ENST00000477538 B4GALNT4Q76KP1 1039 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 SFTPA1Q8IWL2 248 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 SLC35B2Q8TB61 432 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 TFB1MQ8WVM0 346 aaKnown RBP16.53■□□□□ 0.24
VHL-203ENST00000477538 FAM3CQ92520 227 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 TTC17Q96AE7 1141 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 ACDQ96AP0 544 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 TSGA13Q96PP4 275 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 QKIQ96PU8 341 aaKnown RBP eCLIP16.53■□□□□ 0.24
VHL-203ENST00000477538 CIPCQ9C0C6 399 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 FBRSL1Q9HCM7 1045 aaKnown RBP16.53■□□□□ 0.24
VHL-203ENST00000477538 DNPEPQ9ULA0 475 aa16.53■□□□□ 0.24
VHL-203ENST00000477538 ZSCAN5CA6NGD5 496 aaPredicted RBP16.52■□□□□ 0.24
VHL-203ENST00000477538 SHISA7A6NL88 538 aa16.52■□□□□ 0.24
VHL-203ENST00000477538 PRRT4C9JH25 899 aa16.52■□□□□ 0.24
VHL-203ENST00000477538 MAN2B1O00754 1011 aa16.52■□□□□ 0.24
VHL-203ENST00000477538 ASLP04424 464 aa16.52■□□□□ 0.24
VHL-203ENST00000477538 ATP5BP06576 529 aaKnown RBP16.52■□□□□ 0.24
VHL-203ENST00000477538 CCNCP24863 283 aa16.52■□□□□ 0.24
VHL-203ENST00000477538 CTSOP43234 321 aaPredicted RBP16.52■□□□□ 0.24
VHL-203ENST00000477538 ARF5P84085 180 aa16.52■□□□□ 0.24
VHL-203ENST00000477538 PRKCQQ04759 706 aa16.52■□□□□ 0.24
VHL-203ENST00000477538 ZNF33AQ06730 810 aa16.52■□□□□ 0.24
VHL-203ENST00000477538 SNX1Q13596 522 aa16.52■□□□□ 0.24
VHL-203ENST00000477538 BYSLQ13895 437 aaKnown RBP16.52■□□□□ 0.24
VHL-203ENST00000477538 PRKD1Q15139 912 aaPredicted RBP16.52■□□□□ 0.24
VHL-203ENST00000477538 CYP1B1Q16678 543 aa16.52■□□□□ 0.24
VHL-203ENST00000477538 TMEM196Q5HYL7 178 aa16.52■□□□□ 0.24
VHL-203ENST00000477538 DARS2Q6PI48 645 aaKnown RBP16.52■□□□□ 0.24
VHL-203ENST00000477538 LEKR1Q6ZMV7 388 aa16.52■□□□□ 0.24
VHL-203ENST00000477538 CDKL3Q8IVW4 592 aaPredicted RBP16.52■□□□□ 0.24
VHL-203ENST00000477538 CCDC13Q8IYE1 715 aa16.52■□□□□ 0.24
VHL-203ENST00000477538 C12orf50Q8NA57 414 aaPredicted RBP16.52■□□□□ 0.24
VHL-203ENST00000477538 UHRF1Q96T88 793 aaPredicted RBP16.52■□□□□ 0.24
VHL-203ENST00000477538 PDFQ9HBH1 243 aa16.52■□□□□ 0.24
VHL-203ENST00000477538 ELOVL2Q9NXB9 296 aa16.52■□□□□ 0.24
VHL-203ENST00000477538 SLC25A13Q9UJS0 675 aa16.52■□□□□ 0.24
VHL-203ENST00000477538 A0A0A0MRY4 1105 aa16.51■□□□□ 0.23
VHL-203ENST00000477538 TIMM44O43615 452 aa16.51■□□□□ 0.23
VHL-203ENST00000477538 PHF2O75151 1096 aa16.51■□□□□ 0.23
VHL-203ENST00000477538 VAV1P15498 845 aa16.51■□□□□ 0.23
VHL-203ENST00000477538 DRD1P21728 446 aa16.51■□□□□ 0.23
VHL-203ENST00000477538 GEMIN4P57678 1058 aaKnown RBP16.51■□□□□ 0.23
VHL-203ENST00000477538 ECT2LQ008S8 904 aa16.51■□□□□ 0.23
VHL-203ENST00000477538 GRSF1Q12849 480 aaKnown RBP eCLIP16.51■□□□□ 0.23
VHL-203ENST00000477538 OASLQ15646 514 aaKnown RBP16.51■□□□□ 0.23
VHL-203ENST00000477538 FSTL4Q6MZW2 842 aa16.51■□□□□ 0.23
VHL-203ENST00000477538 RETSATQ6NUM9 610 aa16.51■□□□□ 0.23
VHL-203ENST00000477538 DRICH1Q6PGQ1 229 aaPredicted RBP16.51■□□□□ 0.23
VHL-203ENST00000477538 LINGO4Q6UY18 593 aa16.51■□□□□ 0.23
VHL-203ENST00000477538 ZNF852Q6ZMS4 543 aa16.51■□□□□ 0.23
VHL-203ENST00000477538 CYB5D2Q8WUJ1 264 aa16.51■□□□□ 0.23
VHL-203ENST00000477538 NSMCE1Q8WV22 266 aa16.51■□□□□ 0.23
VHL-203ENST00000477538 UCMAQ8WVF2 138 aa16.51■□□□□ 0.23
VHL-203ENST00000477538 SORCS1Q8WY21 1168 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms