RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 CD52P31358 61 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 CAPRIN1Q14444 709 aaKnown RBP14.88□□□□□ -0.03
HDAC6-220ENST00000477528 LBRQ14739 615 aaKnown RBP14.88□□□□□ -0.03
HDAC6-220ENST00000477528 DPYSL2Q16555 572 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 NDRG1Q92597 394 aaKnown RBP14.88□□□□□ -0.03
HDAC6-220ENST00000477528 C7orf26Q96N11 449 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 ADGRE3Q9BY15 652 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.88□□□□□ -0.03
HDAC6-220ENST00000477528 CLASP2O75122 1294 aaKnown RBP14.88□□□□□ -0.03
HDAC6-220ENST00000477528 MYO1DO94832 1006 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 SCNN1BP51168 640 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 SLC18A1P54219 525 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 WDR4P57081 412 aaKnown RBP14.88□□□□□ -0.03
HDAC6-220ENST00000477528 INSCQ1MX18 579 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 TMTC4Q5T4D3 741 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 TMEM110Q86TL2 294 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 ZFP42Q96MM3 310 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 SUFUQ9UMX1 484 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 MYH11P35749 1972 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 ZBBXA8MT70 800 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 CABYRO75952 493 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 WARSP23381 471 aaKnown RBP14.88□□□□□ -0.03
HDAC6-220ENST00000477528 FOXN2P32314 431 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 NAGLUP54802 743 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 CLDN10P78369 228 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 CA9Q16790 459 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 AGKQ53H12 422 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 TEX44Q53QW1 395 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 DCLRE1AQ6PJP8 1040 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 NET1Q7Z628 596 aaPredicted RBP14.88□□□□□ -0.03
HDAC6-220ENST00000477528 RELL1Q8IUW5 271 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 GLIS1Q8NBF1 620 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 MAGEC3Q8TD91 643 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 MARCH2Q9P0N8 246 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 SIX4Q9UIU6 781 aa14.88□□□□□ -0.03
HDAC6-220ENST00000477528 ENTPD5O75356 428 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 ZBTB48P10074 688 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-220ENST00000477528 SNX32Q86XE0 403 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 RDH11Q8TC12 318 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 CRLS1Q9UJA2 301 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 ADAMTS5Q9UNA0 930 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-220ENST00000477528 EDNRBP24530 442 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 LMO2P25791 158 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 SCNN1AP37088 669 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 MSLNQ13421 630 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-220ENST00000477528 SOWAHAQ2M3V2 549 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 INTS6LQ5JSJ4 861 aaKnown RBP14.87□□□□□ -0.03
HDAC6-220ENST00000477528 ALYREFQ86V81 257 aaKnown RBP14.87□□□□□ -0.03
HDAC6-220ENST00000477528 TTC30AQ86WT1 665 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 FAM136AQ96C01 138 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 ACE2Q9BYF1 805 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-220ENST00000477528 POLR1EQ9GZS1 481 aaKnown RBP14.87□□□□□ -0.03
HDAC6-220ENST00000477528 MRPL46Q9H2W6 279 aaKnown RBP14.87□□□□□ -0.03
HDAC6-220ENST00000477528 C12orf65Q9H3J6 166 aaKnown RBP14.87□□□□□ -0.03
HDAC6-220ENST00000477528 CBX4O00257 560 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 SPDYAQ5MJ70 313 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 ANGPTL8Q6UXH0 198 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 POMKQ9H5K3 350 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 MRPL42Q9Y6G3 142 aaKnown RBP14.87□□□□□ -0.03
HDAC6-220ENST00000477528 MBL2P11226 248 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-220ENST00000477528 TUSC3Q13454 348 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 SLC41A1Q8IVJ1 513 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 C10orf107Q8IVU9 208 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 PYROXD2Q8N2H3 581 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 TMEM174Q8WUU8 243 aa14.87□□□□□ -0.03
HDAC6-220ENST00000477528 IGKV6D-21A0A0A0MT36 114 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 NUMBP49757 651 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 TCHHL1Q5QJ38 904 aaPredicted RBP14.86□□□□□ -0.03
HDAC6-220ENST00000477528 POTEHQ6S545 545 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 XYLT2Q9H1B5 865 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 ARL8BQ9NVJ2 186 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 FZD10Q9ULW2 581 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 NENFQ9UMX5 172 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 NRAPQ86VF7 1730 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 PDE5AO76074 875 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 TMCC1O94876 653 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 AKT1P31749 480 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 L1CAMP32004 1257 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 BRCC3P46736 316 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 INCA1Q0VD86 236 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 TTLL9Q3SXZ7 439 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 FAM117BQ6P1L5 589 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 SLC30A9Q6PML9 568 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 IRGQQ8WZA9 623 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 SERAC1Q96JX3 654 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 APOL5Q9BWW9 433 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 ZYG11BQ9C0D3 744 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 DTLQ9NZJ0 730 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 TELO2Q9Y4R8 837 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 SPRYD7Q5W111 196 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 CMC1Q7Z7K0 106 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 LGI2Q8N0V4 545 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 SLC9A7Q96T83 725 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 ASPSCR1Q9BZE9 553 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 SLC12A4Q9UP95 1085 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 CNTN6Q9UQ52 1028 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 TNRC6CQ9HCJ0 1690 aaKnown RBP14.86□□□□□ -0.03
HDAC6-220ENST00000477528 TTLL13PA6NNM8 815 aa14.86□□□□□ -0.03
HDAC6-220ENST00000477528 RAB10P61026 200 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms