RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 MCF2LO15068 1137 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 ATP9BO43861 1147 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 NEBLO76041 1014 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 MYL1P05976 194 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 PDGFRAP16234 1089 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 TACR2P21452 398 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 TGM2P21980 687 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 VASPP50552 380 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-213ENST00000476777 DUSP3P51452 185 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-213ENST00000476777 PLK1P53350 603 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 SLC12A1Q13621 1099 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 ZNF284Q2VY69 593 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 ARL13BQ3SXY8 428 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 FOXD4L6Q3SYB3 417 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-213ENST00000476777 CBWD6Q4V339 395 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 ZCWPW2Q504Y3 356 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 CBWD3Q5JTY5 395 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 CBWD5Q5RIA9 395 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 PIP5KL1Q5T9C9 394 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 RAP1GAP2Q684P5 730 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 FOXD4L3Q6VB84 417 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-213ENST00000476777 CCDC81Q6ZN84 652 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 SLC22A18ASQ8N1D0 253 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 EXD3Q8N9H8 876 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 OR13H1Q8NG92 308 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 IFI44Q8TCB0 444 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 KLK6Q92876 244 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 GRAMD1AQ96CP6 724 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 CCDC97Q96F63 343 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-213ENST00000476777 NOX5Q96PH1 765 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 ZSWIM1Q9BR11 485 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 DUSP23Q9BVJ7 150 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 CALN1Q9BXU9 219 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 TRIM4Q9C037 500 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 NAALADL1Q9UQQ1 740 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 COQ4Q9Y3A0 265 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 PCDHGA8Q9Y5G5 932 aa11.7□□□□□ -0.54
BRCA1-213ENST00000476777 UTP20O75691 2785 aaKnown RBP11.69□□□□□ -0.54
BRCA1-213ENST00000476777 A0A1W2PQU0 124 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 NEMP2A6NFY4 417 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 C1QTNF3-AMACRE9PGA6 284 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 ALOX15BO15296 676 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 STX10O60499 249 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 FBXO21O94952 628 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 RHOBTB3O94955 611 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 YWHAEP62258 255 aaKnown RBP11.69□□□□□ -0.54
BRCA1-213ENST00000476777 NFATC3Q12968 1075 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 CLN3Q13286 438 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 DLG2Q15700 870 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 ZC3H12AQ5D1E8 599 aaKnown RBP11.69□□□□□ -0.54
BRCA1-213ENST00000476777 ZNF542PQ5EBM4 170 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 FOXD4L5Q5VV16 416 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-213ENST00000476777 NEK5Q6P3R8 708 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 GCNT7Q6ZNI0 430 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 ABI3BPQ7Z7G0 1075 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 TAC4Q86UU9 113 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 HORMAD1Q86X24 394 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 CHSY1Q86X52 802 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 CCAR2Q8N163 923 aaKnown RBP11.69□□□□□ -0.54
BRCA1-213ENST00000476777 GUF1Q8N442 669 aaKnown RBP11.69□□□□□ -0.54
BRCA1-213ENST00000476777 FOXD4L4Q8WXT5 416 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-213ENST00000476777 ALG14Q96F25 216 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 IFT43Q96FT9 208 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 HSFY1Q96LI6 401 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 FZD3Q9NPG1 666 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 EVA1BQ9NVM1 165 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 ENTPD2Q9Y5L3 495 aa11.69□□□□□ -0.54
BRCA1-213ENST00000476777 UNC13CQ8NB66 2214 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 CREBBPQ92793 2442 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 M0QYV0 167 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 TERTO14746 1132 aaKnown RBP11.68□□□□□ -0.54
BRCA1-213ENST00000476777 EFSO43281 561 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 APOEP02649 317 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 CTSLP07711 333 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 PAEPP09466 180 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 HNRNPA2B1P22626 353 aaKnown RBP11.68□□□□□ -0.54
BRCA1-213ENST00000476777 AKT2P31751 481 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 CLDN2P57739 230 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 CNGA2Q16280 664 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 CDKN3Q16667 212 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 EDRF1Q3B7T1 1238 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 LINC00303Q3SY05 128 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 ACCSLQ4AC99 568 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 COLEC12Q5KU26 742 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 SYPL2Q5VXT5 272 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 CXorf57Q6NSI4 855 aaKnown RBP11.68□□□□□ -0.54
BRCA1-213ENST00000476777 GUSBP11Q6P575 273 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 TMEM270Q6UE05 265 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 RBM44Q6ZP01 1051 aaKnown RBP11.68□□□□□ -0.54
BRCA1-213ENST00000476777 Q6ZSR6 202 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 Q6ZVU0 165 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 CLEC14AQ86T13 490 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 CIR1Q86X95 450 aaPredicted RBP11.68□□□□□ -0.54
BRCA1-213ENST00000476777 ERCC4Q92889 916 aaPredicted RBP11.68□□□□□ -0.54
BRCA1-213ENST00000476777 BTN2A3PQ96KV6 586 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 PRMT1Q99873 361 aaKnown RBP11.68□□□□□ -0.54
BRCA1-213ENST00000476777 FAM117AQ9C073 453 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 MIS12Q9H081 205 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 GPR27Q9NS67 375 aa11.68□□□□□ -0.54
BRCA1-213ENST00000476777 DNAJC28Q9NX36 388 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms