RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 REV3LO60673 3130 aa7.21□□□□□ -1.26
LRCH3-215ENST00000476664 SSC5DA1L4H1 1573 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 LAMB1P07942 1786 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 A0A0U1RQK1 487 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 ZNF320A2RRD8 509 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 CCDC151A5D8V7 595 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 MPHOSPH10O00566 681 aaKnown RBP7.2□□□□□ -1.26
LRCH3-215ENST00000476664 NDC80O14777 642 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 EXOC3O60645 756 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 CFIP05156 583 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 SNRNP70P08621 437 aaKnown RBP7.2□□□□□ -1.26
LRCH3-215ENST00000476664 SNRPA1P09661 255 aaKnown RBP7.2□□□□□ -1.26
LRCH3-215ENST00000476664 ALADP13716 330 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 CPA2P48052 419 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 STAT5BP51692 787 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 MRPL12P52815 198 aaKnown RBP7.2□□□□□ -1.26
LRCH3-215ENST00000476664 CDH8P55286 799 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 YWHAHQ04917 246 aaPredicted RBP7.2□□□□□ -1.26
LRCH3-215ENST00000476664 DUSP8Q13202 625 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 THOC5Q13769 683 aaKnown RBP7.2□□□□□ -1.26
LRCH3-215ENST00000476664 IRF3Q14653 427 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 EIF4HQ15056 248 aaKnown RBP7.2□□□□□ -1.26
LRCH3-215ENST00000476664 PPA1Q15181 289 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 UNC5DQ6UXZ4 953 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 CHST9Q7L1S5 443 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 NUP54Q7Z3B4 507 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 SPARTQ8N0X7 666 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 OR6J1Q8NGC5 347 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 SMARCC2Q8TAQ2 1214 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 SLC22A18Q96BI1 424 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 PERPQ96FX8 193 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 CABS1Q96KC9 395 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 GCNAQ96QF7 691 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 KLHL4Q9C0H6 718 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 KATNBL1Q9H079 304 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 MROH8Q9H579 483 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 EPHX3Q9H6B9 360 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 OPA3Q9H6K4 179 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.2□□□□□ -1.26
LRCH3-215ENST00000476664 VAV3Q9UKW4 847 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 IKBKGQ9Y6K9 419 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 ATRXP46100 2492 aa7.2□□□□□ -1.26
LRCH3-215ENST00000476664 CFAP47Q6ZTR5 3102 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 hCG_1809904A0A1W2PP81 198 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 A0A1W2PPE2 198 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 A0A1W2PR64 198 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 FRMD3A2A2Y4 597 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 MBD3L5A6NJ08 208 aaPredicted RBP7.19□□□□□ -1.26
LRCH3-215ENST00000476664 CYP26A1O43174 497 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 CCL5P13501 91 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 KRT10P13645 584 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 COX7A2P14406 83 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 LAG3P18627 525 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 MCM3P25205 808 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 HK2P52789 917 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 PTTG1IPP53801 180 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 INHBEP58166 350 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 UFM1P61960 85 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 IL1RL1Q01638 556 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 NHLH1Q02575 133 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 COASYQ13057 564 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 ARHGEF6Q15052 776 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 P3H1Q32P28 736 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 MSANTD2Q6P1R3 559 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 TAF2Q6P1X5 1199 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 LAYNQ6UX15 382 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 UBE3BQ7Z3V4 1068 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 GLRX5Q86SX6 157 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 NBPF5PQ86XG9 351 aaPredicted RBP7.19□□□□□ -1.26
LRCH3-215ENST00000476664 TMIEQ8NEW7 156 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 SETD6Q8TBK2 473 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 FNIP1Q8TF40 1166 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 HSPH1Q92598 858 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 ALG3Q92685 438 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 GCDHQ92947 438 aaPredicted RBP7.19□□□□□ -1.26
LRCH3-215ENST00000476664 LPPQ93052 612 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 SMARCE1Q969G3 411 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 SLC46A1Q96NT5 459 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 TSGA13Q96PP4 275 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 HIST1H2AAQ96QV6 131 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 PAAF1Q9BRP4 392 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 IMPG2Q9BZV3 1241 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 TTYH3Q9C0H2 523 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 VPS51Q9UID3 782 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 CDC42EP3Q9UKI2 254 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 CDYLQ9Y232 598 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 OSGIN2Q9Y236 505 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 BTBD3Q9Y2F9 522 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 NEU2Q9Y3R4 380 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 DNAH12Q6ZR08 3092 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 KIF7Q2M1P5 1343 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 RAB3GAP2Q9H2M9 1393 aa7.19□□□□□ -1.26
LRCH3-215ENST00000476664 SETXQ7Z333 2677 aaKnown RBP7.18□□□□□ -1.26
LRCH3-215ENST00000476664 FAM237BA0A1B0GVD1 139 aa7.18□□□□□ -1.26
LRCH3-215ENST00000476664 MANSC4A6NHS7 340 aaPredicted RBP7.18□□□□□ -1.26
LRCH3-215ENST00000476664 CXorf49A8MYA2 514 aaPredicted RBP7.18□□□□□ -1.26
LRCH3-215ENST00000476664 TEX22C9J3V5 150 aa7.18□□□□□ -1.26
LRCH3-215ENST00000476664 H0YAE9 185 aa7.18□□□□□ -1.26
LRCH3-215ENST00000476664 PLOD2O00469 737 aa7.18□□□□□ -1.26
LRCH3-215ENST00000476664 CD3EAPO15446 510 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms