RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 CNDP2Q96KP4 475 aaKnown RBP10.76□□□□□ -0.69
ABCF1-205ENST00000475993 CIB1Q99828 191 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 C1orf50Q9BV19 199 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 RAB6BQ9NRW1 208 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 SLC9A2Q9UBY0 812 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 DCDC2Q9UHG0 476 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 PCDHB4Q9Y5E5 795 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 PCP4L1A6NKN8 68 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 CLOCKO15516 846 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 ZNF182P17025 639 aaPredicted RBP10.75□□□□□ -0.69
ABCF1-205ENST00000475993 MYF6P23409 242 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 GRM5P41594 1212 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 ROR1Q01973 937 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 RHDQ02161 417 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 CUL2Q13617 745 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 TUBA3CQ13748 450 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 TBC1D10BQ4KMP7 808 aaPredicted RBP10.75□□□□□ -0.69
ABCF1-205ENST00000475993 SLC9A4Q6AI14 798 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 SCARA3Q6AZY7 606 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 PPP4R4Q6NUP7 873 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 SLC39A4Q6P5W5 647 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 SIX6OS1Q8N1H7 587 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 LINC00469Q8N7U9 141 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 ZSCAN18Q8TBC5 510 aaPredicted RBP10.75□□□□□ -0.69
ABCF1-205ENST00000475993 DUS3LQ96G46 650 aaKnown RBP10.75□□□□□ -0.69
ABCF1-205ENST00000475993 ALPK1Q96QP1 1244 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 ZNF577Q9BSK1 485 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 TEKT3Q9BXF9 490 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 RNPEPQ9H4A4 650 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 DDX4Q9NQI0 724 aaKnown RBP10.75□□□□□ -0.69
ABCF1-205ENST00000475993 SEPT3Q9UH03 358 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 C9IYK1 514 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 H3BUI4 141 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 TRIM38O00635 465 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 LRCH4O75427 683 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 TADA2AO75478 443 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 HLA-DRAP01903 254 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 CXCR2P25025 360 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 MAGEA3P43357 314 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 MAGEA6P43360 314 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 HNRNPFP52597 415 aaKnown RBP10.75□□□□□ -0.69
ABCF1-205ENST00000475993 HERC3Q15034 1050 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 HMBOX1Q6NT76 420 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 GALNT18Q6P9A2 607 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 C15orf52Q6ZUT6 534 aaKnown RBP10.75□□□□□ -0.69
ABCF1-205ENST00000475993 RFX6Q8HWS3 928 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 GALNT6Q8NCL4 622 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 PEX13Q92968 403 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 SLCO4A1Q96BD0 722 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 VPS35Q96QK1 796 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 TRPV6Q9H1D0 765 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 ZNF385DQ9H6B1 395 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 PAK5Q9P286 719 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 TANC1Q9C0D5 1861 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 LOC102724428A0A0B4J2F2 783 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 TPP1O14773 563 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 GNAO1P09471 354 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 ARP10275 920 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 COL6A1P12109 1028 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 RFC1P35251 1148 aaPredicted RBP10.75□□□□□ -0.69
ABCF1-205ENST00000475993 NR4A2P43354 598 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 PSMD8P48556 350 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 SIK1P57059 783 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 CLDN10P78369 228 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 PRAMEP78395 509 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 TRAF2Q12933 501 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 SELENBP1Q13228 472 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 NOMO1Q15155 1222 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 INSCQ1MX18 579 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 ZACNQ401N2 412 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 FAM47CQ5HY64 1035 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 RSBN1LQ6PCB5 846 aaPredicted RBP10.75□□□□□ -0.69
ABCF1-205ENST00000475993 DARS2Q6PI48 645 aaKnown RBP10.75□□□□□ -0.69
ABCF1-205ENST00000475993 UTS2BQ765I0 119 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 CYP2U1Q7Z449 544 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 ZC3H7AQ8IWR0 971 aaKnown RBP10.75□□□□□ -0.69
ABCF1-205ENST00000475993 MFSD2AQ8NA29 543 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 TMEM161BQ8NDZ6 487 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 DEPDC1BQ8WUY9 529 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 ZNF606Q8WXB4 792 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 TOP1MTQ969P6 601 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 PLEKHA5Q9HAU0 1116 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 APOBEC3GQ9HC16 384 aaKnown RBP10.75□□□□□ -0.69
ABCF1-205ENST00000475993 SUCOQ9UBS9 1254 aaKnown RBP10.75□□□□□ -0.69
ABCF1-205ENST00000475993 DAPK2Q9UIK4 370 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 DAGLAQ9Y4D2 1042 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 SNX13Q9Y5W8 968 aa10.75□□□□□ -0.69
ABCF1-205ENST00000475993 SCN4AP35499 1836 aa10.74□□□□□ -0.69
ABCF1-205ENST00000475993 SNTNA6NMZ2 147 aa10.74□□□□□ -0.69
ABCF1-205ENST00000475993 DLGAP1O14490 977 aa10.74□□□□□ -0.69
ABCF1-205ENST00000475993 CLPXO76031 633 aa10.74□□□□□ -0.69
ABCF1-205ENST00000475993 VAPBO95292 243 aa10.74□□□□□ -0.69
ABCF1-205ENST00000475993 TCN1P20061 433 aaPredicted RBP10.74□□□□□ -0.69
ABCF1-205ENST00000475993 QARSP47897 775 aaKnown RBP10.74□□□□□ -0.69
ABCF1-205ENST00000475993 COL19A1Q14993 1142 aa10.74□□□□□ -0.69
ABCF1-205ENST00000475993 AGAP7PQ5VUJ5 663 aa10.74□□□□□ -0.69
ABCF1-205ENST00000475993 TUBA3EQ6PEY2 450 aa10.74□□□□□ -0.69
ABCF1-205ENST00000475993 ZBTB49Q6ZSB9 765 aa10.74□□□□□ -0.69
ABCF1-205ENST00000475993 HERC6Q8IVU3 1022 aa10.74□□□□□ -0.69
ABCF1-205ENST00000475993 COLGALT2Q8IYK4 626 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms