RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 SDC3O75056 442 aa16.06■□□□□ 0.16
SRRT-209ENST00000474896 PRB1P04280 392 aa16.06■□□□□ 0.16
SRRT-209ENST00000474896 CCR1P32246 355 aa16.06■□□□□ 0.16
SRRT-209ENST00000474896 NUDT1P36639 197 aa16.06■□□□□ 0.16
SRRT-209ENST00000474896 VASPP50552 380 aaPredicted RBP16.06■□□□□ 0.16
SRRT-209ENST00000474896 TYRO3Q06418 890 aa16.06■□□□□ 0.16
SRRT-209ENST00000474896 OVGP1Q12889 678 aa16.06■□□□□ 0.16
SRRT-209ENST00000474896 PAK1Q13153 545 aa16.06■□□□□ 0.16
SRRT-209ENST00000474896 MEA1Q16626 185 aa16.06■□□□□ 0.16
SRRT-209ENST00000474896 TTC39BQ5VTQ0 682 aaPredicted RBP16.06■□□□□ 0.16
SRRT-209ENST00000474896 TRIM69Q86WT6 500 aa16.06■□□□□ 0.16
SRRT-209ENST00000474896 TRIM59Q8IWR1 403 aa16.06■□□□□ 0.16
SRRT-209ENST00000474896 DEFB106AQ8N104 65 aa16.06■□□□□ 0.16
SRRT-209ENST00000474896 OR52K2Q8NGK3 314 aa16.06■□□□□ 0.16
SRRT-209ENST00000474896 ALG14Q96F25 216 aa16.06■□□□□ 0.16
SRRT-209ENST00000474896 KLHDC7BQ96G42 594 aa16.06■□□□□ 0.16
SRRT-209ENST00000474896 RPRD1AQ96P16 312 aaPredicted RBP16.06■□□□□ 0.16
SRRT-209ENST00000474896 ANO10Q9NW15 660 aa16.06■□□□□ 0.16
SRRT-209ENST00000474896 DDIT4Q9NX09 232 aa16.06■□□□□ 0.16
SRRT-209ENST00000474896 SLC25A13Q9UJS0 675 aa16.06■□□□□ 0.16
SRRT-209ENST00000474896 NYNRINQ9P2P1 1898 aaKnown RBP16.05■□□□□ 0.16
SRRT-209ENST00000474896 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.05■□□□□ 0.16
SRRT-209ENST00000474896 BICDL2A1A5D9 508 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 PRAMEF26H0Y7S4 382 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 TRIM38O00635 465 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 MCF2LO15068 1137 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 BNIP3LO60238 219 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 AFPP02771 609 aaKnown RBP16.05■□□□□ 0.16
SRRT-209ENST00000474896 GLDCP23378 1020 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 ACP1P24666 158 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 GNA15P30679 374 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 STX17P56962 302 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 CENPCQ03188 943 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 C19orf57Q0VDD7 668 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 ZNF177Q13360 481 aaPredicted RBP16.05■□□□□ 0.16
SRRT-209ENST00000474896 AUHQ13825 339 aaKnown RBP16.05■□□□□ 0.16
SRRT-209ENST00000474896 PROX2Q3B8N5 592 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 SETMARQ53H47 684 aaPredicted RBP16.05■□□□□ 0.16
SRRT-209ENST00000474896 AGBL4Q5VU57 503 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 CACTIN-AS1Q8N1I8 211 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 SLC25A45Q8N413 288 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 SLC39A7Q92504 469 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 FGF11Q92914 225 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 VANGL2Q9ULK5 521 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 CLCA2Q9UQC9 943 aa16.05■□□□□ 0.16
SRRT-209ENST00000474896 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.05■□□□□ 0.16
SRRT-209ENST00000474896 C1QTNF3-AMACRE9PGA6 284 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 SLC31A1O15431 190 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 SIGLEC6O43699 453 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 GRAP2O75791 330 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 GNA14O95837 355 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 USP8P40818 1118 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 IRAK1P51617 712 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 INSM1Q01101 510 aaPredicted RBP16.04■□□□□ 0.16
SRRT-209ENST00000474896 PDCLQ13371 301 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 EFHC1Q5JVL4 640 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 FOXR2Q6PJQ5 311 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 C11orf57Q6ZUT1 292 aaPredicted RBP16.04■□□□□ 0.16
SRRT-209ENST00000474896 Q6ZVU0 165 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 WDTC1Q8N5D0 677 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 RFFLQ8WZ73 363 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 BAP1Q92560 729 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 KLK6Q92876 244 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 SLC2A13Q96QE2 648 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 FUCA2Q9BTY2 467 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 SRRTQ9BXP5 876 aaKnown RBP16.04■□□□□ 0.16
SRRT-209ENST00000474896 RWDD2AQ9UIY3 292 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 VPS28Q9UK41 221 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 OR51B4Q9Y5P0 310 aa16.04■□□□□ 0.16
SRRT-209ENST00000474896 TDRD6O60522 2096 aaKnown RBP16.03■□□□□ 0.16
SRRT-209ENST00000474896 TK2O00142 265 aa16.03■□□□□ 0.16
SRRT-209ENST00000474896 ALOX15BO15296 676 aa16.03■□□□□ 0.16
SRRT-209ENST00000474896 BRINP1O60477 761 aa16.03■□□□□ 0.16
SRRT-209ENST00000474896 RNGTTO60942 597 aaKnown RBP16.03■□□□□ 0.16
SRRT-209ENST00000474896 ZIC2O95409 532 aaPredicted RBP16.03■□□□□ 0.16
SRRT-209ENST00000474896 GLI1P08151 1106 aa16.03■□□□□ 0.16
SRRT-209ENST00000474896 TAS2R38P59533 333 aa16.03■□□□□ 0.16
SRRT-209ENST00000474896 E2F1Q01094 437 aa16.03■□□□□ 0.16
SRRT-209ENST00000474896 NME3Q13232 169 aa16.03■□□□□ 0.16
SRRT-209ENST00000474896 ZNF211Q13398 564 aaPredicted RBP16.03■□□□□ 0.16
SRRT-209ENST00000474896 CT47A1Q5JQC4 288 aaPredicted RBP16.03■□□□□ 0.16
SRRT-209ENST00000474896 GJB7Q6PEY0 223 aa16.03■□□□□ 0.16
SRRT-209ENST00000474896 KDM7AQ6ZMT4 941 aa16.03■□□□□ 0.16
SRRT-209ENST00000474896 C14orf80Q86SX3 495 aa16.03■□□□□ 0.16
SRRT-209ENST00000474896 SH2D3CQ8N5H7 860 aa16.03■□□□□ 0.16
SRRT-209ENST00000474896 SNIP1Q8TAD8 396 aaKnown RBP16.03■□□□□ 0.16
SRRT-209ENST00000474896 PPP1R13BQ96KQ4 1090 aa16.03■□□□□ 0.16
SRRT-209ENST00000474896 CPXM1Q96SM3 734 aa16.03■□□□□ 0.16
SRRT-209ENST00000474896 MYOCQ99972 504 aa16.03■□□□□ 0.16
SRRT-209ENST00000474896 SIK2Q9H0K1 926 aa16.03■□□□□ 0.16
SRRT-209ENST00000474896 PREBQ9HCU5 417 aa16.03■□□□□ 0.16
SRRT-209ENST00000474896 FARP1Q9Y4F1 1045 aaPredicted RBP16.03■□□□□ 0.16
SRRT-209ENST00000474896 HS3ST4Q9Y661 456 aa16.03■□□□□ 0.16
SRRT-209ENST00000474896 GCN1Q92616 2671 aaKnown RBP16.03■□□□□ 0.16
SRRT-209ENST00000474896 BPTFQ12830 3046 aa16.03■□□□□ 0.16
SRRT-209ENST00000474896 ATXN7O15265 892 aaPredicted RBP16.02■□□□□ 0.16
SRRT-209ENST00000474896 CLDN11O75508 207 aa16.02■□□□□ 0.16
SRRT-209ENST00000474896 MT-CO1P00395 513 aa16.02■□□□□ 0.16
SRRT-209ENST00000474896 MT-CO3P00414 261 aa16.02■□□□□ 0.16
SRRT-209ENST00000474896 CTSLP07711 333 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms