RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 DNAI1Q9UI46 699 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 SLCO3A1Q9UIG8 710 aa17.34■□□□□ 0.37
SCAF11-206ENST00000474828 C3orf70A6NLC5 250 aaPredicted RBP17.33■□□□□ 0.36
SCAF11-206ENST00000474828 KDELR3O43731 214 aa17.33■□□□□ 0.36
SCAF11-206ENST00000474828 GABRG2P18507 467 aa17.33■□□□□ 0.36
SCAF11-206ENST00000474828 COMTP21964 271 aa17.33■□□□□ 0.36
SCAF11-206ENST00000474828 ARF5P84085 180 aa17.33■□□□□ 0.36
SCAF11-206ENST00000474828 SERINC3Q13530 473 aa17.33■□□□□ 0.36
SCAF11-206ENST00000474828 DPYSL3Q14195 570 aa17.33■□□□□ 0.36
SCAF11-206ENST00000474828 POLD3Q15054 466 aaPredicted RBP17.33■□□□□ 0.36
SCAF11-206ENST00000474828 PPP6R3Q5H9R7 873 aaPredicted RBP17.33■□□□□ 0.36
SCAF11-206ENST00000474828 PLPP6Q8IY26 295 aa17.33■□□□□ 0.36
SCAF11-206ENST00000474828 MDGA1Q8NFP4 955 aa17.33■□□□□ 0.36
SCAF11-206ENST00000474828 TSTD1Q8NFU3 115 aa17.33■□□□□ 0.36
SCAF11-206ENST00000474828 UBE2Q2Q8WVN8 375 aa17.33■□□□□ 0.36
SCAF11-206ENST00000474828 HSPH1Q92598 858 aa17.33■□□□□ 0.36
SCAF11-206ENST00000474828 PTPRN2Q92932 1015 aa17.33■□□□□ 0.36
SCAF11-206ENST00000474828 HHIPQ96QV1 700 aa17.33■□□□□ 0.36
SCAF11-206ENST00000474828 DESI2Q9BSY9 194 aa17.33■□□□□ 0.36
SCAF11-206ENST00000474828 PRSS16Q9NQE7 514 aa17.33■□□□□ 0.36
SCAF11-206ENST00000474828 ATG2BQ96BY7 2078 aa17.33■□□□□ 0.36
SCAF11-206ENST00000474828 PSTPIP1O43586 416 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 SNAP91O60641 907 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 ZNF821O75541 412 aaPredicted RBP17.32■□□□□ 0.36
SCAF11-206ENST00000474828 ALDH1A2O94788 518 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 MT-CO1P00395 513 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 IGLV3-19P01714 112 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 CD48P09326 243 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 SRCP12931 536 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 ACVRL1P37023 503 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 ARL4AP40617 200 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 WASP42768 502 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 STK19P49842 368 aaPredicted RBP17.32■□□□□ 0.36
SCAF11-206ENST00000474828 ST8SIA6P61647 398 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 KIF5AQ12840 1032 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 STARD3Q14849 445 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 FNDC3BQ53EP0 1204 aaKnown RBP17.32■□□□□ 0.36
SCAF11-206ENST00000474828 C9orf64Q5T6V5 341 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 RETSATQ6NUM9 610 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 RHOT1Q8IXI2 618 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 RNF10Q8N5U6 811 aaKnown RBP17.32■□□□□ 0.36
SCAF11-206ENST00000474828 NPWQ8N729 165 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 ISG20Q96AZ6 181 aaKnown RBP17.32■□□□□ 0.36
SCAF11-206ENST00000474828 MRGPRX1Q96LB2 322 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 CEP44Q9C0F1 390 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 MKRN2Q9H000 416 aaKnown RBP17.32■□□□□ 0.36
SCAF11-206ENST00000474828 PRDM16Q9HAZ2 1276 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 PDFQ9HBH1 243 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 ATP13A1Q9HD20 1204 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 RAD54BQ9Y620 910 aa17.32■□□□□ 0.36
SCAF11-206ENST00000474828 A0A0U1RQJ8 604 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 EDDM13A0A1B0GTR0 161 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 ZSCAN5CA6NGD5 496 aaPredicted RBP17.31■□□□□ 0.36
SCAF11-206ENST00000474828 TTC34A8MYJ7 566 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 RASA4BC9J798 803 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 AXIN1O15169 862 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 RASA4O43374 803 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 EPHX1P07099 455 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 HLA-EP13747 358 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 NDUFV2P19404 249 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 GLDCP23378 1020 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 KDELR1P24390 212 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 NOP2P46087 812 aaKnown RBP17.31■□□□□ 0.36
SCAF11-206ENST00000474828 FNTBP49356 437 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 SERPINH1P50454 418 aaKnown RBP17.31■□□□□ 0.36
SCAF11-206ENST00000474828 CDH6P55285 790 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 GEMIN4P57678 1058 aaKnown RBP17.31■□□□□ 0.36
SCAF11-206ENST00000474828 PAFAH1B3Q15102 231 aaKnown RBP17.31■□□□□ 0.36
SCAF11-206ENST00000474828 INO80DQ53TQ3 878 aaPredicted RBP17.31■□□□□ 0.36
SCAF11-206ENST00000474828 MAP7D3Q8IWC1 876 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 OR2T3Q8NH03 318 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 PCDH19Q8TAB3 1148 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 CASKIN2Q8WXE0 1202 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 ATRIPQ8WXE1 791 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 RAPGEF5Q92565 580 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 VOPP1Q96AW1 172 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 RPL10LQ96L21 214 aaKnown RBP17.31■□□□□ 0.36
SCAF11-206ENST00000474828 RSPH9Q9H1X1 276 aaPredicted RBP17.31■□□□□ 0.36
SCAF11-206ENST00000474828 SEMA4AQ9H3S1 761 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 ETNK2Q9NVF9 386 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 DDX56Q9NY93 547 aaKnown RBP17.31■□□□□ 0.36
SCAF11-206ENST00000474828 SLC25A13Q9UJS0 675 aa17.31■□□□□ 0.36
SCAF11-206ENST00000474828 TCRBV21S2A2A0A5A6 115 aa17.3■□□□□ 0.36
SCAF11-206ENST00000474828 GRID2IPA4D2P6 1211 aa17.3■□□□□ 0.36
SCAF11-206ENST00000474828 SYNCRIPO60506 623 aaKnown RBP17.3■□□□□ 0.36
SCAF11-206ENST00000474828 AMPD1P23109 780 aa17.3■□□□□ 0.36
SCAF11-206ENST00000474828 NNMTP40261 264 aa17.3■□□□□ 0.36
SCAF11-206ENST00000474828 ZBTB16Q05516 673 aa17.3■□□□□ 0.36
SCAF11-206ENST00000474828 MAP7D1Q3KQU3 841 aa17.3■□□□□ 0.36
SCAF11-206ENST00000474828 ANKRD20A8PQ5CZ79 823 aa17.3■□□□□ 0.36
SCAF11-206ENST00000474828 ZC3H14Q6PJT7 736 aaKnown RBP17.3■□□□□ 0.36
SCAF11-206ENST00000474828 KIAA1328Q86T90 577 aa17.3■□□□□ 0.36
SCAF11-206ENST00000474828 KATNAL2Q8IYT4 538 aa17.3■□□□□ 0.36
SCAF11-206ENST00000474828 PQLC3Q8N755 202 aa17.3■□□□□ 0.36
SCAF11-206ENST00000474828 FAM131CQ96AQ9 280 aa17.3■□□□□ 0.36
SCAF11-206ENST00000474828 HMCESQ96FZ2 354 aa17.3■□□□□ 0.36
SCAF11-206ENST00000474828 FAM129BQ96TA1 746 aa17.3■□□□□ 0.36
SCAF11-206ENST00000474828 SLC39A8Q9C0K1 460 aa17.3■□□□□ 0.36
SCAF11-206ENST00000474828 EPC1Q9H2F5 836 aa17.3■□□□□ 0.36
SCAF11-206ENST00000474828 USP36Q9P275 1121 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms