RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 DEUP1Q05D60 604 aa15.54■□□□□ 0.08
VARS-223ENST00000474643 AUHQ13825 339 aaKnown RBP15.54■□□□□ 0.08
VARS-223ENST00000474643 ARID5BQ14865 1188 aa15.54■□□□□ 0.08
VARS-223ENST00000474643 FAM46CQ5VWP2 391 aa15.54■□□□□ 0.08
VARS-223ENST00000474643 LAYNQ6UX15 382 aa15.54■□□□□ 0.08
VARS-223ENST00000474643 LMLNQ96KR4 655 aa15.54■□□□□ 0.08
VARS-223ENST00000474643 SELENOOQ9BVL4 669 aa15.54■□□□□ 0.08
VARS-223ENST00000474643 TTYH3Q9C0H2 523 aa15.54■□□□□ 0.08
VARS-223ENST00000474643 NEUROG2Q9H2A3 272 aa15.54■□□□□ 0.08
VARS-223ENST00000474643 HAUS4Q9H6D7 363 aa15.54■□□□□ 0.08
VARS-223ENST00000474643 AIPL1Q9NZN9 384 aa15.54■□□□□ 0.08
VARS-223ENST00000474643 ZMIZ1Q9ULJ6 1067 aa15.54■□□□□ 0.08
VARS-223ENST00000474643 MSRB2Q9Y3D2 182 aa15.54■□□□□ 0.08
VARS-223ENST00000474643 ITIH6Q6UXX5 1313 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 TBC1D3DA0A087WVF3 549 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 TBC1D3IA0A087WXS9 549 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 TBC1D3EA0A087X179 549 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 TBC1D3KA0A087X1G2 549 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 ANKRD62A6NC57 917 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 TBC1D3FA6NER0 549 aaPredicted RBP15.53■□□□□ 0.08
VARS-223ENST00000474643 TBC1D3LB9A6J9 549 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 C1QTNF3-AMACRE9PGA6 284 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 PAGE1O75459 146 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 CLDN11O75508 207 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 F9P00740 461 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 TBC1D3HP0C7X1 549 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 SKILP12757 684 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 GOT1P17174 413 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 MZF1P28698 734 aaPredicted RBP15.53■□□□□ 0.08
VARS-223ENST00000474643 GGCXP38435 758 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 GRK6P43250 576 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 GALCP54803 685 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 KRT83P78385 493 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 ZBED6P86452 979 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 BRMS1LQ5PSV4 323 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 TBC1D3GQ6DHY5 549 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 TBC1D3CQ6IPX1 549 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 PPP1R2P3Q6NXS1 205 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 FBXL22Q6P050 247 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 VPS36Q86VN1 386 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 TBC1D3Q8IZP1 549 aaPredicted RBP15.53■□□□□ 0.08
VARS-223ENST00000474643 PNPLA1Q8N8W4 532 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 IGSF8Q969P0 613 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 MYO19Q96H55 970 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.53■□□□□ 0.08
VARS-223ENST00000474643 TRIM5Q9C035 493 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 TKTL2Q9H0I9 626 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 OSGEPQ9NPF4 335 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 TMEM51Q9NW97 253 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 SERGEFQ9UGK8 458 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 PCOLCE2Q9UKZ9 415 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 TPX2Q9ULW0 747 aaKnown RBP15.53■□□□□ 0.08
VARS-223ENST00000474643 CAPN11Q9UMQ6 739 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 PCDHGB2Q9Y5G2 931 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 HS3ST4Q9Y661 456 aa15.53■□□□□ 0.08
VARS-223ENST00000474643 ASPMQ8IZT6 3477 aa15.52■□□□□ 0.08
VARS-223ENST00000474643 FRYQ5TBA9 3013 aa15.52■□□□□ 0.08
VARS-223ENST00000474643 DFNA5O60443 496 aa15.52■□□□□ 0.08
VARS-223ENST00000474643 RHOCP08134 193 aa15.52■□□□□ 0.08
VARS-223ENST00000474643 CDH4P55283 916 aa15.52■□□□□ 0.08
VARS-223ENST00000474643 IL9RQ01113 521 aa15.52■□□□□ 0.08
VARS-223ENST00000474643 TRIM14Q14142 442 aa15.52■□□□□ 0.08
VARS-223ENST00000474643 TSR1Q2NL82 804 aaKnown RBP15.52■□□□□ 0.08
VARS-223ENST00000474643 SPECC1LQ69YQ0 1117 aa15.52■□□□□ 0.08
VARS-223ENST00000474643 ACAD10Q6JQN1 1059 aa15.52■□□□□ 0.08
VARS-223ENST00000474643 DNAJC24Q6P3W2 148 aa15.52■□□□□ 0.08
VARS-223ENST00000474643 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.52■□□□□ 0.08
VARS-223ENST00000474643 PHF13Q86YI8 300 aaPredicted RBP15.52■□□□□ 0.08
VARS-223ENST00000474643 ATP11CQ8NB49 1132 aa15.52■□□□□ 0.08
VARS-223ENST00000474643 MRFAP1L1Q96HT8 127 aa15.52■□□□□ 0.08
VARS-223ENST00000474643 SERAC1Q96JX3 654 aa15.52■□□□□ 0.08
VARS-223ENST00000474643 SLC6A18Q96N87 628 aa15.52■□□□□ 0.08
VARS-223ENST00000474643 PRMT1Q99873 361 aaKnown RBP15.52■□□□□ 0.08
VARS-223ENST00000474643 C2orf49Q9BVC5 232 aaPredicted RBP15.52■□□□□ 0.08
VARS-223ENST00000474643 DYRK4Q9NR20 520 aa15.52■□□□□ 0.08
VARS-223ENST00000474643 GDF3Q9NR23 364 aa15.52■□□□□ 0.08
VARS-223ENST00000474643 BZW2Q9Y6E2 419 aaKnown RBP15.52■□□□□ 0.08
VARS-223ENST00000474643 CACNA1EQ15878 2313 aa15.52■□□□□ 0.07
VARS-223ENST00000474643 KMT2BQ9UMN6 2715 aaPredicted RBP15.52■□□□□ 0.07
VARS-223ENST00000474643 A0A1W2PPC4 97 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 KCNK3O14649 394 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 GYPCP04921 128 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 KRT3P12035 628 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 DESP17661 470 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 CD38P28907 300 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 SDC4P31431 198 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 CASP14P31944 242 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 FLT3P36888 993 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 PRKCIP41743 596 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 RECQLP46063 649 aaPredicted RBP15.51■□□□□ 0.07
VARS-223ENST00000474643 ADPRHP54922 357 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 C1QBPQ07021 282 aaKnown RBP15.51■□□□□ 0.07
VARS-223ENST00000474643 CCDC15Q0P6D6 951 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 GSE1Q14687 1217 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 SLC25A52Q3SY17 297 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 POM121L1PQ3SYA9 428 aa15.51■□□□□ 0.07
VARS-223ENST00000474643 ACBD5Q5T8D3 534 aaPredicted RBP15.51■□□□□ 0.07
VARS-223ENST00000474643 E4F1Q66K89 784 aaPredicted RBP15.51■□□□□ 0.07
VARS-223ENST00000474643 ZNF571Q7Z3V5 609 aaPredicted RBP15.51■□□□□ 0.07
VARS-223ENST00000474643 PRPF39Q86UA1 669 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms