RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 APCDD1Q8J025 514 aa20.83■□□□□ 0.93
APP-215ENST00000474136 ZNF557Q8N988 423 aaPredicted RBP20.83■□□□□ 0.93
APP-215ENST00000474136 KDM1BQ8NB78 822 aa20.83■□□□□ 0.93
APP-215ENST00000474136 FBXL13Q8NEE6 735 aa20.83■□□□□ 0.93
APP-215ENST00000474136 PTPRN2Q92932 1015 aa20.83■□□□□ 0.93
APP-215ENST00000474136 FAXDC2Q96IV6 333 aa20.83■□□□□ 0.93
APP-215ENST00000474136 HIC2Q96JB3 615 aa20.83■□□□□ 0.93
APP-215ENST00000474136 IRX2Q9BZI1 471 aaPredicted RBP20.83■□□□□ 0.93
APP-215ENST00000474136 NUCKS1Q9H1E3 243 aaKnown RBP20.83■□□□□ 0.93
APP-215ENST00000474136 CNGB3Q9NQW8 809 aa20.83■□□□□ 0.93
APP-215ENST00000474136 IMPACTQ9P2X3 320 aa20.83■□□□□ 0.93
APP-215ENST00000474136 CA5BQ9Y2D0 317 aa20.83■□□□□ 0.93
APP-215ENST00000474136 DAAM1Q9Y4D1 1078 aa20.83■□□□□ 0.93
APP-215ENST00000474136 MYO18BQ8IUG5 2567 aa20.83■□□□□ 0.93
APP-215ENST00000474136 CAPN8A6NHC0 703 aa20.82■□□□□ 0.92
APP-215ENST00000474136 ADH1BP00325 375 aa20.82■□□□□ 0.92
APP-215ENST00000474136 IL1BP01584 269 aa20.82■□□□□ 0.92
APP-215ENST00000474136 SRPRAP08240 638 aaKnown RBP20.82■□□□□ 0.92
APP-215ENST00000474136 MZF1P28698 734 aaPredicted RBP20.82■□□□□ 0.92
APP-215ENST00000474136 STK19P49842 368 aaPredicted RBP20.82■□□□□ 0.92
APP-215ENST00000474136 PCBP4P57723 403 aaKnown RBP20.82■□□□□ 0.92
APP-215ENST00000474136 E2F1Q01094 437 aa20.82■□□□□ 0.92
APP-215ENST00000474136 RHDQ02161 417 aa20.82■□□□□ 0.92
APP-215ENST00000474136 CDH18Q13634 790 aa20.82■□□□□ 0.92
APP-215ENST00000474136 TRIM14Q14142 442 aa20.82■□□□□ 0.92
APP-215ENST00000474136 LY6DQ14210 128 aa20.82■□□□□ 0.92
APP-215ENST00000474136 EXOC3L4Q17RC7 722 aa20.82■□□□□ 0.92
APP-215ENST00000474136 VSTM4Q8IW00 320 aa20.82■□□□□ 0.92
APP-215ENST00000474136 SLC25A45Q8N413 288 aa20.82■□□□□ 0.92
APP-215ENST00000474136 CLEC4CQ8WTT0 213 aa20.82■□□□□ 0.92
APP-215ENST00000474136 KCTD13Q8WZ19 329 aa20.82■□□□□ 0.92
APP-215ENST00000474136 COQ4Q9Y3A0 265 aa20.82■□□□□ 0.92
APP-215ENST00000474136 CEP83Q9Y592 693 aa20.82■□□□□ 0.92
APP-215ENST00000474136 TEX33O43247 280 aa20.81■□□□□ 0.92
APP-215ENST00000474136 RTN2O75298 545 aa20.81■□□□□ 0.92
APP-215ENST00000474136 TPM1P09493 284 aa20.81■□□□□ 0.92
APP-215ENST00000474136 PBX1P40424 430 aa20.81■□□□□ 0.92
APP-215ENST00000474136 TMPRSS3P57727 454 aa20.81■□□□□ 0.92
APP-215ENST00000474136 ECT2LQ008S8 904 aa20.81■□□□□ 0.92
APP-215ENST00000474136 PKDCCQ504Y2 493 aa20.81■□□□□ 0.92
APP-215ENST00000474136 DCAF6Q58WW2 860 aa20.81■□□□□ 0.92
APP-215ENST00000474136 PRPF39Q86UA1 669 aaKnown RBP20.81■□□□□ 0.92
APP-215ENST00000474136 SCML4Q8N228 414 aa20.81■□□□□ 0.92
APP-215ENST00000474136 FCRL2Q96LA5 508 aaPredicted RBP20.81■□□□□ 0.92
APP-215ENST00000474136 PCMTD1Q96MG8 357 aaPredicted RBP20.81■□□□□ 0.92
APP-215ENST00000474136 CYTH4Q9UIA0 394 aa20.81■□□□□ 0.92
APP-215ENST00000474136 O00370 1275 aa20.8■□□□□ 0.92
APP-215ENST00000474136 GABREP78334 506 aa20.8■□□□□ 0.92
APP-215ENST00000474136 DAB2P98082 770 aa20.8■□□□□ 0.92
APP-215ENST00000474136 ZNF211Q13398 564 aaPredicted RBP20.8■□□□□ 0.92
APP-215ENST00000474136 SYCP1Q15431 976 aa20.8■□□□□ 0.92
APP-215ENST00000474136 POM121L1PQ3SYA9 428 aa20.8■□□□□ 0.92
APP-215ENST00000474136 MS4A13Q5J8X5 152 aa20.8■□□□□ 0.92
APP-215ENST00000474136 BROXQ5VW32 411 aa20.8■□□□□ 0.92
APP-215ENST00000474136 FAM181AQ8N9Y4 354 aa20.8■□□□□ 0.92
APP-215ENST00000474136 AZIN2Q96A70 460 aa20.8■□□□□ 0.92
APP-215ENST00000474136 WBP1Q96G27 269 aa20.8■□□□□ 0.92
APP-215ENST00000474136 FAM81BQ96LP2 452 aa20.8■□□□□ 0.92
APP-215ENST00000474136 ZNF578Q96N58 590 aaPredicted RBP20.8■□□□□ 0.92
APP-215ENST00000474136 UCKL1Q9NWZ5 548 aa20.8■□□□□ 0.92
APP-215ENST00000474136 XPO7Q9UIA9 1087 aaKnown RBP20.8■□□□□ 0.92
APP-215ENST00000474136 TPX2Q9ULW0 747 aaKnown RBP20.8■□□□□ 0.92
APP-215ENST00000474136 HECTD1Q9ULT8 2610 aa20.8■□□□□ 0.92
APP-215ENST00000474136 TYW5A2RUC4 315 aaKnown RBP20.79■□□□□ 0.92
APP-215ENST00000474136 LUC7L3O95232 432 aaKnown RBP20.79■□□□□ 0.92
APP-215ENST00000474136 SETSIPP0DME0 302 aa20.79■□□□□ 0.92
APP-215ENST00000474136 MYF5P13349 255 aa20.79■□□□□ 0.92
APP-215ENST00000474136 KRT10P13645 584 aa20.79■□□□□ 0.92
APP-215ENST00000474136 ELAVL3Q14576 367 aaKnown RBP20.79■□□□□ 0.92
APP-215ENST00000474136 CBWD6Q4V339 395 aa20.79■□□□□ 0.92
APP-215ENST00000474136 FIGNQ5HY92 759 aa20.79■□□□□ 0.92
APP-215ENST00000474136 CBWD3Q5JTY5 395 aa20.79■□□□□ 0.92
APP-215ENST00000474136 CBWD5Q5RIA9 395 aa20.79■□□□□ 0.92
APP-215ENST00000474136 CDCP2Q5VXM1 449 aa20.79■□□□□ 0.92
APP-215ENST00000474136 RNF219Q5W0B1 726 aaPredicted RBP20.79■□□□□ 0.92
APP-215ENST00000474136 PMF1Q6P1K2 205 aa20.79■□□□□ 0.92
APP-215ENST00000474136 TMC6Q7Z403 805 aa20.79■□□□□ 0.92
APP-215ENST00000474136 IQCHQ86VS3 1027 aa20.79■□□□□ 0.92
APP-215ENST00000474136 TFAP2BQ92481 460 aa20.79■□□□□ 0.92
APP-215ENST00000474136 DDX50Q9BQ39 737 aaKnown RBP20.79■□□□□ 0.92
APP-215ENST00000474136 EDEM3Q9BZQ6 932 aa20.79■□□□□ 0.92
APP-215ENST00000474136 PLCB1Q9NQ66 1216 aa20.79■□□□□ 0.92
APP-215ENST00000474136 FFAR2O15552 330 aa20.78■□□□□ 0.92
APP-215ENST00000474136 MOCS3O95396 460 aa20.78■□□□□ 0.92
APP-215ENST00000474136 MOCS2O96007 188 aaPredicted RBP20.78■□□□□ 0.92
APP-215ENST00000474136 LTFP02788 710 aa20.78■□□□□ 0.92
APP-215ENST00000474136 VDRP11473 427 aa20.78■□□□□ 0.92
APP-215ENST00000474136 CUL2Q13617 745 aa20.78■□□□□ 0.92
APP-215ENST00000474136 STAT4Q14765 748 aa20.78■□□□□ 0.92
APP-215ENST00000474136 SMYD5Q6GMV2 418 aa20.78■□□□□ 0.92
APP-215ENST00000474136 CCDC117Q8IWD4 279 aaPredicted RBP20.78■□□□□ 0.92
APP-215ENST00000474136 EHBP1Q8NDI1 1231 aa20.78■□□□□ 0.92
APP-215ENST00000474136 NEK11Q8NG66 645 aa20.78■□□□□ 0.92
APP-215ENST00000474136 SLC35F5Q8WV83 523 aa20.78■□□□□ 0.92
APP-215ENST00000474136 TTC9Q92623 222 aa20.78■□□□□ 0.92
APP-215ENST00000474136 FAM131CQ96AQ9 280 aa20.78■□□□□ 0.92
APP-215ENST00000474136 PDLIM2Q96JY6 352 aa20.78■□□□□ 0.92
APP-215ENST00000474136 MYOCQ99972 504 aa20.78■□□□□ 0.92
APP-215ENST00000474136 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.78■□□□□ 0.92
APP-215ENST00000474136 CLMPQ9H6B4 373 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms