RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 PTPRDP23468 1912 aa7.8□□□□□ -1.16
CCDC93-207ENST00000474006 hCG_1818297A0A087WSY0 165 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.79□□□□□ -1.16
CCDC93-207ENST00000474006 TCRBV7S2A1N4TA0A589 114 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 OTOL1A6NHN0 477 aaPredicted RBP7.79□□□□□ -1.16
CCDC93-207ENST00000474006 FIGNL2A6NMB9 653 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 WASH4PA8MWX3 477 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 LOC730098B7Z3J9 87 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 CES2O00748 559 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 DCLK1O15075 740 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 CHADO15335 359 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 CST8O60676 142 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 CLDN11O75508 207 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 TJP3O95049 919 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 FGGP02679 453 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 CYBBP04839 570 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 ARSAP15289 507 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 ZFXP17010 805 aaPredicted RBP7.79□□□□□ -1.16
CCDC93-207ENST00000474006 HOXC13P31276 330 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 PTPN7P35236 360 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 IFNAR2P48551 515 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 IDH3AP50213 366 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 CDH4P55283 916 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 DYNLT1P63172 113 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 TNK2Q07912 1038 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 ZNF177Q13360 481 aaPredicted RBP7.79□□□□□ -1.16
CCDC93-207ENST00000474006 TFDP2Q14188 446 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 PDGFRLQ15198 375 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 PPP2R5EQ16537 467 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 LONRF2Q1L5Z9 754 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 AAK1Q2M2I8 961 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.79□□□□□ -1.16
CCDC93-207ENST00000474006 ANO4Q32M45 955 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 ARSJQ5FYB0 599 aaPredicted RBP7.79□□□□□ -1.16
CCDC93-207ENST00000474006 DNTTIP2Q5QJE6 756 aaKnown RBP7.79□□□□□ -1.16
CCDC93-207ENST00000474006 RABGAP1LQ5R372 815 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 MPP7Q5T2T1 576 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 SEL1L2Q5TEA6 688 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 FYB2Q5VWT5 728 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 SLC9A4Q6AI14 798 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 C1orf228Q6PIY5 440 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 BTLAQ7Z6A9 289 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 ADAT2Q7Z6V5 191 aaKnown RBP7.79□□□□□ -1.16
CCDC93-207ENST00000474006 NLRP14Q86W24 1093 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 SLC13A5Q86YT5 568 aaPredicted RBP7.79□□□□□ -1.16
CCDC93-207ENST00000474006 CARNMT1Q8N4J0 409 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 PLD5Q8N7P1 536 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 NAT16Q8N8M0 369 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 HJURPQ8NCD3 748 aaPredicted RBP7.79□□□□□ -1.16
CCDC93-207ENST00000474006 TTC8Q8TAM2 541 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 ACTRT1Q8TDG2 376 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.79□□□□□ -1.16
CCDC93-207ENST00000474006 DEPDC1BQ8WUY9 529 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 ATP2A3Q93084 1043 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 NXPE3Q969Y0 559 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 MRRFQ96E11 262 aaKnown RBP7.79□□□□□ -1.16
CCDC93-207ENST00000474006 HSH2DQ96JZ2 352 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 CAPZA3Q96KX2 299 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 PRICKLE1Q96MT3 831 aaPredicted RBP7.79□□□□□ -1.16
CCDC93-207ENST00000474006 BBS2Q9BXC9 721 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 RETREG1Q9H6L5 497 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 CATSPERBQ9H7T0 1116 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 ECT2Q9H8V3 914 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 PRDM16Q9HAZ2 1276 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 NEUROD4Q9HD90 331 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 NDFIP2Q9NV92 336 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 TMEM248Q9NWD8 314 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 PLK2Q9NYY3 685 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 SMARCAL1Q9NZC9 954 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 IGSF9Q9P2J2 1179 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 SAE1Q9UBE0 346 aaPredicted RBP7.79□□□□□ -1.16
CCDC93-207ENST00000474006 TTC7AQ9ULT0 858 aaPredicted RBP7.79□□□□□ -1.16
CCDC93-207ENST00000474006 CLEC4EQ9ULY5 219 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 NEU3Q9UQ49 428 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 MFHAS1Q9Y4C4 1052 aa7.79□□□□□ -1.16
CCDC93-207ENST00000474006 A0A1W2PNR3 127 aa7.78□□□□□ -1.16
CCDC93-207ENST00000474006 NEDD8-MDP1E9PL57 170 aa7.78□□□□□ -1.16
CCDC93-207ENST00000474006 H0Y626 953 aa7.78□□□□□ -1.16
CCDC93-207ENST00000474006 PDE2AO00408 941 aaPredicted RBP7.78□□□□□ -1.16
CCDC93-207ENST00000474006 APOL1O14791 398 aa7.78□□□□□ -1.16
CCDC93-207ENST00000474006 FGF10O15520 208 aaPredicted RBP7.78□□□□□ -1.16
CCDC93-207ENST00000474006 NFATC1O95644 943 aa7.78□□□□□ -1.16
CCDC93-207ENST00000474006 PENKP01210 267 aaPredicted RBP7.78□□□□□ -1.16
CCDC93-207ENST00000474006 CYP17A1P05093 508 aa7.78□□□□□ -1.16
CCDC93-207ENST00000474006 ASGR2P07307 311 aa7.78□□□□□ -1.16
CCDC93-207ENST00000474006 TYRP14679 529 aa7.78□□□□□ -1.16
CCDC93-207ENST00000474006 HOXD9P28356 352 aaPredicted RBP7.78□□□□□ -1.16
CCDC93-207ENST00000474006 OR1E1P30953 314 aa7.78□□□□□ -1.16
CCDC93-207ENST00000474006 NR2C2P49116 596 aa7.78□□□□□ -1.16
CCDC93-207ENST00000474006 ARSDP51689 593 aa7.78□□□□□ -1.16
CCDC93-207ENST00000474006 GAD2Q05329 585 aa7.78□□□□□ -1.16
CCDC93-207ENST00000474006 SLC10A2Q12908 348 aaPredicted RBP7.78□□□□□ -1.16
CCDC93-207ENST00000474006 RUNX3Q13761 415 aa7.78□□□□□ -1.16
CCDC93-207ENST00000474006 TUBB2AQ13885 445 aa7.78□□□□□ -1.16
CCDC93-207ENST00000474006 PAFAH1B3Q15102 231 aaKnown RBP7.78□□□□□ -1.16
CCDC93-207ENST00000474006 FSCBQ5H9T9 825 aa7.78□□□□□ -1.16
CCDC93-207ENST00000474006 CCDC181Q5TID7 509 aa7.78□□□□□ -1.16
CCDC93-207ENST00000474006 TTC39BQ5VTQ0 682 aaPredicted RBP7.78□□□□□ -1.16
CCDC93-207ENST00000474006 TMCO3Q6UWJ1 677 aa7.78□□□□□ -1.16
CCDC93-207ENST00000474006 NPNTQ6UXI9 565 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms