RNA–Protein interactions for RNA: ENST00000473997.5

CDK5RAP1-210, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK5RAP1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-210ENST00000473997 A0A1B0GVM2 712 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 TCAF2A6NFQ2 919 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 GOLGA6L10A6NI86 522 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 GREM1O60565 184 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 TBL1XO60907 577 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 MOSPD3O75425 235 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 SYF2O95926 243 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 SHBGP04278 402 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 TPSB2P20231 275 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 CD68P34810 354 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 ACVRL1P37023 503 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 RENBPP51606 427 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 EIF3BP55884 814 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 IFI35P80217 286 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 GNA12Q03113 381 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 SERINC3Q13530 473 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 PRPSAP1Q14558 356 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 FASTKD3Q14CZ7 662 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 TPSAB1Q15661 275 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 TTC39BQ5VTQ0 682 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 TMC5Q6UXY8 1006 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 Q6ZNB5 142 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 PALM2Q8IXS6 379 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 TDHQ8IZJ6 230 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 MCUQ8NE86 351 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 ZSCAN18Q8TBC5 510 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 SMG7Q92540 1137 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 BHMTQ93088 406 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 ZNF707Q96C28 371 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 TIFAQ96CG3 184 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 PABPC5Q96DU9 382 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 TTC25Q96NG3 672 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 SERPINB12Q96P63 405 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 SPON2Q9BUD6 331 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 FRMD8Q9BZ67 464 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 CENPHQ9H3R5 247 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 MED4Q9NPJ6 270 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 ARHGAP26Q9UNA1 814 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 MRPS23Q9Y3D9 190 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 NFS1Q9Y697 457 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 PDE4DIPQ5VU43 2346 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 DENND4CQ5VZ89 1909 aa11.9□□□□□ -0.5
CDK5RAP1-210ENST00000473997 A0A0D9SEW6 157 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 H0Y626 953 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 EIF3HO15372 352 aaKnown RBP eCLIP11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 RHOCP08134 193 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 NUDT17P0C025 328 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 NFKB1P19838 968 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 CDK16Q00536 496 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 ZNF844Q08AG5 666 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 SPARCL1Q14515 664 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 PRSS36Q5K4E3 855 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 MARC1Q5VT66 337 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 CAPN12Q6ZSI9 719 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 CHST9Q7L1S5 443 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 OTOP3Q7RTS5 596 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 BBS7Q8IWZ6 715 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 CARNMT1Q8N4J0 409 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 CNTD1Q8N815 330 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 FBXO36Q8NEA4 188 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 SH3RF2Q8TEC5 729 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 DDI1Q8WTU0 396 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 ING5Q8WYH8 240 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 ARHGEF2Q92974 986 aaKnown RBP11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 PPP2R3CQ969Q6 453 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 IL12RB2Q99665 862 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 MAGEH1Q9H213 219 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 GBA3Q9H227 469 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 VPS37BQ9H9H4 285 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 TDP1Q9NUW8 608 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 CCL26Q9Y258 94 aa11.9□□□□□ -0.51
CDK5RAP1-210ENST00000473997 MYO9BQ13459 2157 aa11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 TLDC2A0PJX2 215 aa11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 E7ESA3 106 aa11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 MYZAPP0CAP1 466 aa11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 ELK3P41970 407 aa11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 GRIA1P42261 906 aa11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 IL10RBQ08334 325 aa11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 ITKQ08881 620 aa11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 HNRNPDQ14103 355 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 CBX2Q14781 532 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 SKIDA1Q1XH10 827 aa11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 LEKR1Q6ZMV7 388 aa11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 TPGS1Q6ZTW0 290 aa11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 SETD3Q86TU7 594 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 CAND1Q86VP6 1230 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 TDRD5Q8NAT2 981 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 HJURPQ8NCD3 748 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 MAML1Q92585 1016 aa11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 PHACTR1Q9C0D0 580 aa11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 MUC3BQ9H195 1237 aa11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 LRRC4CQ9HCJ2 640 aa11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 XAB2Q9HCS7 855 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 EIF2B3Q9NR50 452 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 UBP1Q9NZI7 540 aa11.89□□□□□ -0.51
CDK5RAP1-210ENST00000473997 E2F8A0AVK6 867 aa11.88□□□□□ -0.51
CDK5RAP1-210ENST00000473997 ILVBLA1L0T0 632 aa11.88□□□□□ -0.51
CDK5RAP1-210ENST00000473997 GOLGA6CA6NDK9 693 aa11.88□□□□□ -0.51
CDK5RAP1-210ENST00000473997 SMIM23A6NLE4 172 aa11.88□□□□□ -0.51
CDK5RAP1-210ENST00000473997 SOBPA7XYQ1 873 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms