RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 APOL5Q9BWW9 433 aa28.09■■■□□ 2.09
HOXB3-207ENST00000472863 RETREG1Q9H6L5 497 aa28.09■■■□□ 2.09
HOXB3-207ENST00000472863 AVILO75366 819 aa28.08■■■□□ 2.09
HOXB3-207ENST00000472863 PRAMEF12O95522 483 aa28.08■■■□□ 2.09
HOXB3-207ENST00000472863 ARL4CP56559 192 aa28.08■■■□□ 2.09
HOXB3-207ENST00000472863 PDIA2Q13087 525 aaKnown RBP28.08■■■□□ 2.09
HOXB3-207ENST00000472863 SLC29A2Q14542 456 aa28.08■■■□□ 2.09
HOXB3-207ENST00000472863 CENPUQ71F23 418 aa28.08■■■□□ 2.09
HOXB3-207ENST00000472863 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP28.08■■■□□ 2.09
HOXB3-207ENST00000472863 OR7D4Q8NG98 312 aa28.08■■■□□ 2.09
HOXB3-207ENST00000472863 ARHGEF2Q92974 986 aaKnown RBP28.08■■■□□ 2.09
HOXB3-207ENST00000472863 SFXN1Q9H9B4 322 aa28.08■■■□□ 2.09
HOXB3-207ENST00000472863 RSPH14Q9UHP6 348 aa28.08■■■□□ 2.09
HOXB3-207ENST00000472863 ZNF510Q9Y2H8 683 aa28.08■■■□□ 2.09
HOXB3-207ENST00000472863 RIPK2O43353 540 aa28.08■■■□□ 2.09
HOXB3-207ENST00000472863 GLP2RO95838 553 aa28.08■■■□□ 2.09
HOXB3-207ENST00000472863 GNA12Q03113 381 aa28.08■■■□□ 2.09
HOXB3-207ENST00000472863 TRMT10CQ7L0Y3 403 aaKnown RBP28.08■■■□□ 2.09
HOXB3-207ENST00000472863 OTOP3Q7RTS5 596 aa28.08■■■□□ 2.09
HOXB3-207ENST00000472863 RELL1Q8IUW5 271 aa28.08■■■□□ 2.09
HOXB3-207ENST00000472863 UHMK1Q8TAS1 419 aaKnown RBP28.08■■■□□ 2.09
HOXB3-207ENST00000472863 FAM53CQ9NYF3 392 aa28.08■■■□□ 2.09
HOXB3-207ENST00000472863 NFS1Q9Y697 457 aa28.08■■■□□ 2.09
HOXB3-207ENST00000472863 HELZP42694 1942 aaKnown RBP28.07■■■□□ 2.08
HOXB3-207ENST00000472863 LINC01565O15544 149 aa28.07■■■□□ 2.08
HOXB3-207ENST00000472863 NFKB1P19838 968 aa28.07■■■□□ 2.08
HOXB3-207ENST00000472863 GRIA1P42261 906 aa28.07■■■□□ 2.08
HOXB3-207ENST00000472863 HYAL1Q12794 435 aa28.07■■■□□ 2.08
HOXB3-207ENST00000472863 TCEAL5Q5H9L2 206 aa28.07■■■□□ 2.08
HOXB3-207ENST00000472863 SPDYCQ5MJ68 293 aa28.07■■■□□ 2.08
HOXB3-207ENST00000472863 RARS2Q5T160 578 aaKnown RBP28.07■■■□□ 2.08
HOXB3-207ENST00000472863 LEKR1Q6ZMV7 388 aa28.07■■■□□ 2.08
HOXB3-207ENST00000472863 TDRD5Q8NAT2 981 aaKnown RBP28.07■■■□□ 2.08
HOXB3-207ENST00000472863 MAML1Q92585 1016 aa28.07■■■□□ 2.08
HOXB3-207ENST00000472863 SERPINB12Q96P63 405 aa28.07■■■□□ 2.08
HOXB3-207ENST00000472863 MAGEH1Q9H213 219 aa28.07■■■□□ 2.08
HOXB3-207ENST00000472863 GBA3Q9H227 469 aa28.07■■■□□ 2.08
HOXB3-207ENST00000472863 SP110Q9HB58 689 aa28.07■■■□□ 2.08
HOXB3-207ENST00000472863 RBM22Q9NW64 420 aaKnown RBP eCLIP28.07■■■□□ 2.08
HOXB3-207ENST00000472863 NINJ2Q9NZG7 142 aa28.07■■■□□ 2.08
HOXB3-207ENST00000472863 CDH22Q9UJ99 828 aa28.07■■■□□ 2.08
HOXB3-207ENST00000472863 TBC1D30Q9Y2I9 924 aa28.07■■■□□ 2.08
HOXB3-207ENST00000472863 PAPLNO95428 1278 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 ACSL3O95573 720 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 TPSB2P20231 275 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 LMAN1P49257 510 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 TPSAB1Q15661 275 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 C6orf118Q5T5N4 469 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 TTC39BQ5VTQ0 682 aaPredicted RBP28.06■■■□□ 2.08
HOXB3-207ENST00000472863 CAND1Q86VP6 1230 aaKnown RBP28.06■■■□□ 2.08
HOXB3-207ENST00000472863 ARID3BQ8IVW6 561 aaPredicted RBP28.06■■■□□ 2.08
HOXB3-207ENST00000472863 ZBED8Q8IZ13 594 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 PDIK1LQ8N165 341 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 CARNMT1Q8N4J0 409 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 HJURPQ8NCD3 748 aaPredicted RBP28.06■■■□□ 2.08
HOXB3-207ENST00000472863 PABPC5Q96DU9 382 aaKnown RBP28.06■■■□□ 2.08
HOXB3-207ENST00000472863 CHD5Q8TDI0 1954 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 E2F8A0AVK6 867 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 SOBPA7XYQ1 873 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 ALOX15BO15296 676 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 TTC4O95801 387 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 SLC10A7Q0GE19 358 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 FSCBQ5H9T9 825 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 CXorf57Q6NSI4 855 aaKnown RBP28.06■■■□□ 2.08
HOXB3-207ENST00000472863 TPGS1Q6ZTW0 290 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 ANKMY2Q8IV38 441 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 MCUQ8NE86 351 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 PPP2R3CQ969Q6 453 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 ACBD3Q9H3P7 528 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 TTLL3Q9Y4R7 772 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 SZT2Q5T011 3432 aa28.06■■■□□ 2.08
HOXB3-207ENST00000472863 SHBGP04278 402 aa28.05■■■□□ 2.08
HOXB3-207ENST00000472863 RHOCP08134 193 aa28.05■■■□□ 2.08
HOXB3-207ENST00000472863 BBS9Q3SYG4 887 aa28.05■■■□□ 2.08
HOXB3-207ENST00000472863 ITPRIPL1Q6GPH6 555 aa28.05■■■□□ 2.08
HOXB3-207ENST00000472863 ZNF534Q76KX8 674 aa28.05■■■□□ 2.08
HOXB3-207ENST00000472863 SETD3Q86TU7 594 aaPredicted RBP28.05■■■□□ 2.08
HOXB3-207ENST00000472863 CPXM2Q8N436 756 aa28.05■■■□□ 2.08
HOXB3-207ENST00000472863 DDI1Q8WTU0 396 aa28.05■■■□□ 2.08
HOXB3-207ENST00000472863 WDR83Q9BRX9 315 aaKnown RBP28.05■■■□□ 2.08
HOXB3-207ENST00000472863 SPON2Q9BUD6 331 aa28.05■■■□□ 2.08
HOXB3-207ENST00000472863 PRO3102Q9H379 93 aa28.05■■■□□ 2.08
HOXB3-207ENST00000472863 ZNF576Q9H609 170 aa28.05■■■□□ 2.08
HOXB3-207ENST00000472863 NSUN3Q9H649 340 aaKnown RBP28.05■■■□□ 2.08
HOXB3-207ENST00000472863 PLK2Q9NYY3 685 aa28.05■■■□□ 2.08
HOXB3-207ENST00000472863 C2orf16Q68DN1 1984 aa28.05■■■□□ 2.08
HOXB3-207ENST00000472863 ILVBLA1L0T0 632 aa28.04■■■□□ 2.08
HOXB3-207ENST00000472863 E7ESA3 106 aa28.04■■■□□ 2.08
HOXB3-207ENST00000472863 H0Y626 953 aa28.04■■■□□ 2.08
HOXB3-207ENST00000472863 HLA-DQB2P05538 268 aa28.04■■■□□ 2.08
HOXB3-207ENST00000472863 IL10RBQ08334 325 aa28.04■■■□□ 2.08
HOXB3-207ENST00000472863 HNRNPDQ14103 355 aaKnown RBP28.04■■■□□ 2.08
HOXB3-207ENST00000472863 SPARCL1Q14515 664 aa28.04■■■□□ 2.08
HOXB3-207ENST00000472863 ANO4Q32M45 955 aa28.04■■■□□ 2.08
HOXB3-207ENST00000472863 DENND2CQ68D51 928 aa28.04■■■□□ 2.08
HOXB3-207ENST00000472863 IL31Q6EBC2 164 aa28.04■■■□□ 2.08
HOXB3-207ENST00000472863 CEP128Q6ZU80 1094 aa28.04■■■□□ 2.08
HOXB3-207ENST00000472863 UBP1Q9NZI7 540 aa28.04■■■□□ 2.08
HOXB3-207ENST00000472863 OLIG2Q13516 323 aa28.04■■■□□ 2.08
HOXB3-207ENST00000472863 RNF219Q5W0B1 726 aaPredicted RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms