RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 MDFICQ9P1T7 246 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 SLC25A13Q9UJS0 675 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 AGAP5A6NIR3 686 aa5.08□□□□□ -1.6
CD46-213ENST00000471987 EFCAB8A8MWE9 144 aa5.08□□□□□ -1.6
CD46-213ENST00000471987 PPM1GO15355 546 aaPredicted RBP5.08□□□□□ -1.6
CD46-213ENST00000471987 UNGP13051 313 aaPredicted RBP5.08□□□□□ -1.6
CD46-213ENST00000471987 AVPR1AP37288 418 aa5.08□□□□□ -1.6
CD46-213ENST00000471987 GNALP38405 381 aa5.08□□□□□ -1.6
CD46-213ENST00000471987 SEC61A1P61619 476 aaKnown RBP5.08□□□□□ -1.6
CD46-213ENST00000471987 BTKQ06187 659 aa5.08□□□□□ -1.6
CD46-213ENST00000471987 PICALMQ13492 652 aa5.08□□□□□ -1.6
CD46-213ENST00000471987 BTBD16Q32M84 506 aa5.08□□□□□ -1.6
CD46-213ENST00000471987 C5orf22Q49AR2 442 aa5.08□□□□□ -1.6
CD46-213ENST00000471987 PRSS57Q6UWY2 283 aa5.08□□□□□ -1.6
CD46-213ENST00000471987 CREB3L2Q70SY1 520 aa5.08□□□□□ -1.6
CD46-213ENST00000471987 ZBTB8BQ8NAP8 495 aaPredicted RBP5.08□□□□□ -1.6
CD46-213ENST00000471987 NR4A3Q92570 626 aa5.08□□□□□ -1.6
CD46-213ENST00000471987 CCDC136Q96JN2 1154 aa5.08□□□□□ -1.6
CD46-213ENST00000471987 APOLD1Q96LR9 279 aa5.08□□□□□ -1.6
CD46-213ENST00000471987 PCDHA10Q9Y5I2 948 aa5.08□□□□□ -1.6
CD46-213ENST00000471987 A0A1B0GUV1 79 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 DENND3A2RUS2 1198 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 AQP12BA6NM10 295 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 ASAP2O43150 1006 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 MYZAPP0CAP1 466 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 KRTAP5-9P26371 169 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 CDK7P50613 346 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 TMPRSS3P57727 454 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 KIF5AQ12840 1032 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 STARD3Q14849 445 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 ZACNQ401N2 412 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 ATPAF1Q5TC12 328 aaPredicted RBP5.07□□□□□ -1.6
CD46-213ENST00000471987 KRTAP5-1Q6L8H4 278 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 HEPHL1Q6MZM0 1159 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 TMEM71Q6P5X7 295 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 HORMAD2Q8N7B1 307 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 OR14A16Q8NHC5 309 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 TMEM41AQ96HV5 264 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 SGCZQ96LD1 299 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 SLITRK1Q96PX8 696 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 ZNF556Q9HAH1 456 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 PDE11AQ9HCR9 933 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 Q9N2J8 555 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 GEMIN8Q9NWZ8 242 aaKnown RBP5.07□□□□□ -1.6
CD46-213ENST00000471987 IL36RNQ9UBH0 155 aa5.07□□□□□ -1.6
CD46-213ENST00000471987 PLEKHB1Q9UF11 243 aaPredicted RBP5.07□□□□□ -1.6
CD46-213ENST00000471987 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.06□□□□□ -1.6
CD46-213ENST00000471987 TMEM247A6NEH6 219 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 LDB3O75112 727 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 CAND2O75155 1236 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 TMCC1O94876 653 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 ZNF432O94892 652 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 PPP1R3DO95685 299 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 GNLYP22749 145 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 PRPH2P23942 346 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 TECP42680 631 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 PPP3CCP48454 512 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 PDLIM4P50479 330 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 PLCB4Q15147 1175 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 HLFQ16534 295 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 GFI1BQ5VTD9 330 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 C9orf57Q5W0N0 161 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 SPSB3Q6PJ21 355 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 KIAA1324Q6UXG2 1013 aaKnown RBP5.06□□□□□ -1.6
CD46-213ENST00000471987 C16orf82Q7Z2V1 217 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 CLIP4Q8N3C7 705 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 FAM71BQ8TC56 605 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 SLC35F5Q8WV83 523 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 RTP4Q96DX8 246 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 HDHD5Q9BXW7 423 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 TMEM248Q9NWD8 314 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 FNIP2Q9P278 1114 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 LZTS1Q9Y250 596 aa5.06□□□□□ -1.6
CD46-213ENST00000471987 GOLGA6L3A6NEY3 463 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 SMTNL1A8MU46 457 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 CAMTA2O94983 1202 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 ZBTB11O95625 1053 aaPredicted RBP5.05□□□□□ -1.6
CD46-213ENST00000471987 KRT18P05783 430 aaKnown RBP5.05□□□□□ -1.6
CD46-213ENST00000471987 PRKCHP24723 683 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 ERVFC1-1P60608 527 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 CDK18Q07002 472 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 ALKBH1Q13686 389 aaKnown RBP5.05□□□□□ -1.6
CD46-213ENST00000471987 SPARCL1Q14515 664 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 HNF4GQ14541 408 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 KRTAP27-1Q3LI81 207 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 IL31Q6EBC2 164 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 NFRKBQ6P4R8 1299 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 RINLQ6ZS11 566 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 SRLQ86TD4 932 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 FJX1Q86VR8 437 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 CEP76Q8TAP6 659 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 SLC2A12Q8TD20 617 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 FAM216AQ8WUB2 273 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 STYXQ8WUJ0 223 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 FRG2BQ96QU4 278 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 TRIM31Q9BZY9 425 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 SRPRBQ9Y5M8 271 aaKnown RBP5.05□□□□□ -1.6
CD46-213ENST00000471987 RAI2Q9Y5P3 530 aa5.05□□□□□ -1.6
CD46-213ENST00000471987 GRM8O00222 908 aa5.04□□□□□ -1.6
CD46-213ENST00000471987 LDB2O43679 373 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms