RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 LMLNQ96KR4 655 aa9.42□□□□□ -0.9
CPSF4-211ENST00000471455 MRGPRX3Q96LB0 322 aa9.42□□□□□ -0.9
CPSF4-211ENST00000471455 PRICKLE1Q96MT3 831 aaPredicted RBP9.42□□□□□ -0.9
CPSF4-211ENST00000471455 FCRL3Q96P31 734 aaPredicted RBP9.42□□□□□ -0.9
CPSF4-211ENST00000471455 SPAG5Q96R06 1193 aa9.42□□□□□ -0.9
CPSF4-211ENST00000471455 SERGEFQ9UGK8 458 aa9.42□□□□□ -0.9
CPSF4-211ENST00000471455 SLC12A6Q9UHW9 1150 aa9.42□□□□□ -0.9
CPSF4-211ENST00000471455 PCDHB4Q9Y5E5 795 aa9.42□□□□□ -0.9
CPSF4-211ENST00000471455 TP53BP1Q12888 1972 aaPredicted RBP9.42□□□□□ -0.9
CPSF4-211ENST00000471455 TEX51A0A1B0GUA7 166 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 GOLGA6L7A0A1B0GV03 622 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 A0A1W2PR77 199 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 TTC34A8MYJ7 566 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 C1QTNF3-AMACRE9PGA6 284 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 F5H5T6 163 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 LATO43561 262 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 SMC2O95347 1197 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 MOCS2O96007 188 aaPredicted RBP9.41□□□□□ -0.9
CPSF4-211ENST00000471455 WNT1P04628 370 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 SLC2A3P11169 496 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 GLDCP23378 1020 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 MZF1P28698 734 aaPredicted RBP9.41□□□□□ -0.9
CPSF4-211ENST00000471455 CTSOP43234 321 aaPredicted RBP9.41□□□□□ -0.9
CPSF4-211ENST00000471455 RPS24P62847 133 aaKnown RBP9.41□□□□□ -0.9
CPSF4-211ENST00000471455 LRMPQ12912 555 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 TARDBPQ13148 414 aaKnown RBP eCLIP9.41□□□□□ -0.9
CPSF4-211ENST00000471455 DNAJC3Q13217 504 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 STAT4Q14765 748 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 COBLL1Q53SF7 1204 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 DCAF6Q58WW2 860 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 RABGAP1LQ5R372 815 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 SFMBT2Q5VUG0 894 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 NADSYN1Q6IA69 706 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 PMF1Q6P1K2 205 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 FBXL19Q6PCT2 694 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 LGI2Q8N0V4 545 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 PPM1KQ8N3J5 372 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 OR8D1Q8WZ84 308 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 FGF11Q92914 225 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 BTN2A3PQ96KV6 586 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 FCRL2Q96LA5 508 aaPredicted RBP9.41□□□□□ -0.9
CPSF4-211ENST00000471455 MTG2Q9H4K7 406 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 PRORYQ9H606 182 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 HOOK1Q9UJC3 728 aaKnown RBP9.41□□□□□ -0.9
CPSF4-211ENST00000471455 SLC25A13Q9UJS0 675 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 CLCA2Q9UQC9 943 aa9.41□□□□□ -0.9
CPSF4-211ENST00000471455 PLXNA2O75051 1894 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 A0A1B0GVM2 712 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 TCAF2A6NFQ2 919 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 PSMA7O14818 248 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 ALOX15BO15296 676 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 PMM2O15305 246 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 P4HA2O15460 535 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 MED7O43513 233 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 RNGTTO60942 597 aaKnown RBP9.4□□□□□ -0.9
CPSF4-211ENST00000471455 WFS1O76024 890 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 ZNF202O95125 648 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 ALPPL2P10696 532 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 TACR2P21452 398 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 ACP1P24666 158 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 PPP1R2P41236 205 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 FMO5P49326 533 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 UCNP55089 124 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 DAB2P98082 770 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 PKP1Q13835 747 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 KCNJ12Q14500 433 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 SHBQ15464 509 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 MEA1Q16626 185 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 PRAMEF14Q5SWL7 426 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 ZNF658Q5TYW1 1059 aaPredicted RBP9.4□□□□□ -0.9
CPSF4-211ENST00000471455 BROXQ5VW32 411 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 GPR155Q7Z3F1 870 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 TRIM69Q86WT6 500 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 SMYD4Q8IYR2 804 aaPredicted RBP9.4□□□□□ -0.9
CPSF4-211ENST00000471455 LSMEM2Q8N112 164 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 STK40Q8N2I9 435 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 AADATQ8N5Z0 425 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 UBR7Q8N806 425 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 ATP6V0D2Q8N8Y2 350 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 RFFLQ8WZ73 363 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 RNF34Q969K3 372 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 SLC35C1Q96A29 364 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 SLC39A13Q96H72 371 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 CCDC114Q96M63 670 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 GSDMAQ96QA5 445 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 MED15Q96RN5 788 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 INSM2Q96T92 566 aaPredicted RBP9.4□□□□□ -0.9
CPSF4-211ENST00000471455 MIS12Q9H081 205 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 NUCKS1Q9H1E3 243 aaKnown RBP9.4□□□□□ -0.9
CPSF4-211ENST00000471455 PREBQ9HCU5 417 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 ST7Q9NRC1 585 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 CYTH4Q9UIA0 394 aa9.4□□□□□ -0.9
CPSF4-211ENST00000471455 INTS6Q9UL03 887 aaKnown RBP9.4□□□□□ -0.9
CPSF4-211ENST00000471455 SMG1Q96Q15 3661 aaKnown RBP9.4□□□□□ -0.91
CPSF4-211ENST00000471455 C10orf142B7Z368 130 aa9.39□□□□□ -0.91
CPSF4-211ENST00000471455 PRAMEF26H0Y7S4 382 aa9.39□□□□□ -0.91
CPSF4-211ENST00000471455 H3BM21 787 aa9.39□□□□□ -0.91
CPSF4-211ENST00000471455 CBX4O00257 560 aa9.39□□□□□ -0.91
CPSF4-211ENST00000471455 PIK3R2O00459 728 aa9.39□□□□□ -0.91
CPSF4-211ENST00000471455 PLRG1O43660 514 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms