RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 EDDM13A0A1B0GTR0 161 aa20.21■□□□□ 0.83
HDAC7-220ENST00000471235 CBX4O00257 560 aa20.21■□□□□ 0.83
HDAC7-220ENST00000471235 ATP9BO43861 1147 aa20.21■□□□□ 0.83
HDAC7-220ENST00000471235 RPP40O75818 363 aaKnown RBP20.21■□□□□ 0.83
HDAC7-220ENST00000471235 SRCP12931 536 aa20.21■□□□□ 0.83
HDAC7-220ENST00000471235 VAV1P15498 845 aa20.21■□□□□ 0.83
HDAC7-220ENST00000471235 ERCC2P18074 760 aa20.21■□□□□ 0.83
HDAC7-220ENST00000471235 ARF5P84085 180 aa20.21■□□□□ 0.83
HDAC7-220ENST00000471235 POLD3Q15054 466 aaPredicted RBP20.21■□□□□ 0.83
HDAC7-220ENST00000471235 IL31Q6EBC2 164 aa20.21■□□□□ 0.83
HDAC7-220ENST00000471235 LINGO4Q6UY18 593 aa20.21■□□□□ 0.83
HDAC7-220ENST00000471235 POLNQ7Z5Q5 900 aa20.21■□□□□ 0.83
HDAC7-220ENST00000471235 CACUL1Q86Y37 369 aa20.21■□□□□ 0.83
HDAC7-220ENST00000471235 UMODL1-AS1Q8N2C9 162 aa20.21■□□□□ 0.83
HDAC7-220ENST00000471235 FRS2Q8WU20 508 aa20.21■□□□□ 0.83
HDAC7-220ENST00000471235 TSC1Q92574 1164 aa20.21■□□□□ 0.83
HDAC7-220ENST00000471235 FBRSQ9HAH7 460 aa20.21■□□□□ 0.83
HDAC7-220ENST00000471235 KLHL11Q9NVR0 708 aa20.21■□□□□ 0.83
HDAC7-220ENST00000471235 ZBTB24O43167 697 aaPredicted RBP20.2■□□□□ 0.82
HDAC7-220ENST00000471235 DAPK3O43293 454 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 MT-CO1P00395 513 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 PLA2G5P39877 138 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 NNMTP40261 264 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 ARL4AP40617 200 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 P2RY2P41231 377 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 NOP2P46087 812 aaKnown RBP20.2■□□□□ 0.82
HDAC7-220ENST00000471235 HCAR3P49019 387 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 ARSEP51690 589 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 VAV2P52735 878 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 CDH6P55285 790 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 KRT81Q14533 505 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 ATP13A4Q4VNC1 1196 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 C9orf64Q5T6V5 341 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 NPWQ8N729 165 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 FAM71BQ8TC56 605 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 RLN3Q8WXF3 142 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 HMCESQ96FZ2 354 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 CSPG4P5Q96PW8 444 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 DESI2Q9BSY9 194 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 KLC2Q9H0B6 622 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 PRDM16Q9HAZ2 1276 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 CD93Q9NPY3 652 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 SALL4Q9UJQ4 1053 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 SMG5Q9UPR3 1016 aaKnown RBP20.2■□□□□ 0.82
HDAC7-220ENST00000471235 INVSQ9Y283 1065 aa20.2■□□□□ 0.82
HDAC7-220ENST00000471235 TARSL2A2RTX5 802 aaKnown RBP20.19■□□□□ 0.82
HDAC7-220ENST00000471235 RASA4BC9J798 803 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 K7ERQ8 282 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 DCLK1O15075 740 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 RASA4O43374 803 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 BUB1BO60566 1050 aaPredicted RBP20.19■□□□□ 0.82
HDAC7-220ENST00000471235 KRT7P08729 469 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 CD48P09326 243 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 SERPINH1P50454 418 aaKnown RBP20.19■□□□□ 0.82
HDAC7-220ENST00000471235 YBEYP58557 167 aaPredicted RBP20.19■□□□□ 0.82
HDAC7-220ENST00000471235 SIM2Q14190 667 aaPredicted RBP20.19■□□□□ 0.82
HDAC7-220ENST00000471235 DLG2Q15700 870 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 MAP7D1Q3KQU3 841 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 PARP15Q460N3 678 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 USP39Q53GS9 565 aaKnown RBP20.19■□□□□ 0.82
HDAC7-220ENST00000471235 RETSATQ6NUM9 610 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 TMPRSS6Q8IU80 811 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 SUMF1Q8NBK3 374 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 PTPRN2Q92932 1015 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 NKD2Q969F2 451 aaPredicted RBP20.19■□□□□ 0.82
HDAC7-220ENST00000471235 FAM122AQ96E09 287 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 SEMA4AQ9H3S1 761 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 LRRC19Q9H756 370 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 MFHAS1Q9Y4C4 1052 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 HYOU1Q9Y4L1 999 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 ACTL7AQ9Y615 435 aa20.19■□□□□ 0.82
HDAC7-220ENST00000471235 TP53BP1Q12888 1972 aaPredicted RBP20.18■□□□□ 0.82
HDAC7-220ENST00000471235 PJA2O43164 708 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 SMAD6O43541 496 aaKnown RBP20.18■□□□□ 0.82
HDAC7-220ENST00000471235 CD160O95971 181 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 C7P10643 843 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 BCKDHBP21953 392 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 AMPD1P23109 780 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 RPS14P62263 151 aaKnown RBP20.18■□□□□ 0.82
HDAC7-220ENST00000471235 MMRN1Q13201 1228 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 DPYSL3Q14195 570 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 AFMIDQ63HM1 303 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 ZNF776Q68DI1 518 aaPredicted RBP20.18■□□□□ 0.82
HDAC7-220ENST00000471235 C22orf39Q6P5X5 142 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 PRR23BQ6ZRT6 265 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 Q6ZVU0 165 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 CEP68Q76N32 757 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 KIAA1328Q86T90 577 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 ARHGAP12Q8IWW6 846 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 FAM160A2Q8N612 972 aaPredicted RBP20.18■□□□□ 0.82
HDAC7-220ENST00000471235 FRMD1Q8N878 549 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 ATP11CQ8NB49 1132 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 PRCCQ92733 491 aaPredicted RBP20.18■□□□□ 0.82
HDAC7-220ENST00000471235 SIPA1Q96FS4 1042 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 CELF6Q96J87 481 aaKnown RBP20.18■□□□□ 0.82
HDAC7-220ENST00000471235 SPACA7Q96KW9 195 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 LACRTQ9GZZ8 138 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 RSPH9Q9H1X1 276 aaPredicted RBP20.18■□□□□ 0.82
HDAC7-220ENST00000471235 GOLPH3Q9H4A6 298 aa20.18■□□□□ 0.82
HDAC7-220ENST00000471235 ETNK2Q9NVF9 386 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms