RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 GANCQ8TET4 914 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 UCMAQ8WVF2 138 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 JPH3Q8WXH2 748 aaPredicted RBP6.08□□□□□ -1.44
VARS-222ENST00000470953 NDRG1Q92597 394 aaKnown RBP6.08□□□□□ -1.44
VARS-222ENST00000470953 GRAMD1AQ96CP6 724 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 TNIP3Q96KP6 325 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 CEP295NLQ96MC4 621 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 KCNK16Q96T55 309 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 ZNF518BQ9C0D4 1074 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 PABPC3Q9H361 631 aaKnown RBP6.08□□□□□ -1.44
VARS-222ENST00000470953 SMYD3Q9H7B4 428 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 CYLDQ9NQC7 956 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.08□□□□□ -1.44
VARS-222ENST00000470953 OSER1Q9NX31 292 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 FBXL12Q9NXK8 326 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 EHD2Q9NZN4 543 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 CHMP5Q9NZZ3 219 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 ARHGAP20Q9P2F6 1191 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 NUDT5Q9UKK9 219 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 CDH9Q9ULB4 789 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 RPH3AQ9Y2J0 694 aaPredicted RBP6.08□□□□□ -1.44
VARS-222ENST00000470953 DAAM1Q9Y4D1 1078 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 RYR3Q15413 4870 aa6.08□□□□□ -1.44
VARS-222ENST00000470953 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.07□□□□□ -1.44
VARS-222ENST00000470953 BICDL2A1A5D9 508 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 CPED1A4D0V7 1026 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 FAM221AA4D161 298 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 K7ESM1 405 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 PLD2O14939 933 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 MID1O15344 667 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 ZDHHC11BP0C7U3 371 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 WARSP23381 471 aaKnown RBP6.07□□□□□ -1.44
VARS-222ENST00000470953 UGT1A5P35504 534 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 GNL1P36915 607 aaPredicted RBP6.07□□□□□ -1.44
VARS-222ENST00000470953 PPP1R2P41236 205 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 LEPRP48357 1165 aaKnown RBP6.07□□□□□ -1.44
VARS-222ENST00000470953 GCLMP48507 274 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 MXI1P50539 228 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 CCR5P51681 352 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 ZBTB16Q05516 673 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 ZNF177Q13360 481 aaPredicted RBP6.07□□□□□ -1.44
VARS-222ENST00000470953 ADAM9Q13443 819 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 EDRF1Q3B7T1 1238 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 POM121L1PQ3SYA9 428 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 C14orf28Q4W4Y0 310 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 FNDC3BQ53EP0 1204 aaKnown RBP6.07□□□□□ -1.44
VARS-222ENST00000470953 ZNF658Q5TYW1 1059 aaPredicted RBP6.07□□□□□ -1.44
VARS-222ENST00000470953 HIST2H2BDQ6DRA6 164 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 RBM44Q6ZP01 1051 aaKnown RBP6.07□□□□□ -1.44
VARS-222ENST00000470953 DPH6Q7L8W6 267 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 EFL1Q7Z2Z2 1120 aaKnown RBP6.07□□□□□ -1.44
VARS-222ENST00000470953 LIMS2Q7Z4I7 341 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 ZNF295-AS1Q8N0V1 137 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 FMR1NBQ8N0W7 255 aaPredicted RBP6.07□□□□□ -1.44
VARS-222ENST00000470953 NUP93Q8N1F7 819 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 OXR1Q8N573 874 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 MFSD2AQ8NA29 543 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 OR2T34Q8NGX1 318 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 MYCBPAPQ8TBZ2 947 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 TMC2Q8TDI7 906 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 ERCC4Q92889 916 aaPredicted RBP6.07□□□□□ -1.44
VARS-222ENST00000470953 GSDMAQ96QA5 445 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 SMR3AQ99954 134 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 MRPL45Q9BRJ2 306 aaKnown RBP6.07□□□□□ -1.44
VARS-222ENST00000470953 MFRPQ9BY79 579 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 ELOVL4Q9GZR5 314 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 NACA2Q9H009 215 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 KCTD10Q9H3F6 313 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 DPEP3Q9H4B8 488 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 DLL4Q9NR61 685 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 KRT82Q9NSB4 513 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 RRN3Q9NYV6 651 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 FOXJ2Q9P0K8 574 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 CTNND2Q9UQB3 1225 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 TRAF3IP3Q9Y228 551 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 DIDO1Q9BTC0 2240 aaKnown RBP6.07□□□□□ -1.44
VARS-222ENST00000470953 SCN8AQ9UQD0 1980 aa6.07□□□□□ -1.44
VARS-222ENST00000470953 PRRC2AP48634 2157 aaKnown RBP6.06□□□□□ -1.44
VARS-222ENST00000470953 PRAMEF33A0A0G2JMD5 474 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 GOLGA6L22H0YM25 854 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 BIN1O00499 593 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 MAPK13O15264 365 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 SLC16A3O15427 465 aaKnown RBP6.06□□□□□ -1.44
VARS-222ENST00000470953 LATO43561 262 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 TLR5O60602 858 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 PRAMEF10O60809 474 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 TACC1O75410 805 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 RNASEH2AO75792 299 aaKnown RBP6.06□□□□□ -1.44
VARS-222ENST00000470953 PIAS2O75928 621 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 CNTN5O94779 1100 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 HLA-DRAP01903 254 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 PDGFAP04085 211 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 CD58P19256 250 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 ITIH1P19827 911 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 MAT2AP31153 395 aaKnown RBP6.06□□□□□ -1.44
VARS-222ENST00000470953 TUBP50607 506 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 METAP1P53582 386 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 SLC5A3P53794 718 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 UBE2HP62256 183 aa6.06□□□□□ -1.44
VARS-222ENST00000470953 FKBP3Q00688 224 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms