RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, human

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SND1-208	ENST00000470463	TAB3	Q8N5C8	712 aa	Predicted RBP	11.22	□□□□□ -0.61
SND1-208	ENST00000470463	PDCD7	Q8N8D1	485 aa	Known RBP	11.22	□□□□□ -0.61
SND1-208	ENST00000470463	MRPL43	Q8N983	215 aa	Known RBP	11.22	□□□□□ -0.61
SND1-208	ENST00000470463	KREMEN2	Q8NCW0	462 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	MAFA	Q8NHW3	353 aa	Predicted RBP	11.22	□□□□□ -0.61
SND1-208	ENST00000470463	GABPB2	Q8TAK5	448 aa	Predicted RBP	11.22	□□□□□ -0.61
SND1-208	ENST00000470463	UHMK1	Q8TAS1	419 aa	Known RBP	11.22	□□□□□ -0.61
SND1-208	ENST00000470463	GSDMB	Q8TAX9	411 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	PTCD2	Q8WV60	388 aa	Known RBP	11.22	□□□□□ -0.61
SND1-208	ENST00000470463	TTC17	Q96AE7	1141 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	STAMBPL1	Q96FJ0	436 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	CELF6	Q96J87	481 aa	Known RBP	11.22	□□□□□ -0.61
SND1-208	ENST00000470463	SIGLEC10	Q96LC7	697 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	CDX2	Q99626	313 aa	Predicted RBP	11.22	□□□□□ -0.61
SND1-208	ENST00000470463	KLF16	Q9BXK1	252 aa	Predicted RBP	11.22	□□□□□ -0.61
SND1-208	ENST00000470463	IL22	Q9GZX6	179 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	GLOD4	Q9HC38	313 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	SSU72	Q9NP77	194 aa	Known RBP	11.22	□□□□□ -0.61
SND1-208	ENST00000470463	TLR9	Q9NR96	1032 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	MPP6	Q9NZW5	540 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	RABGEF1	Q9UJ41	708 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	CHMP2B	Q9UQN3	213 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	PCDHA11	Q9Y5I1	949 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	11.21	□□□□□ -0.61
SND1-208	ENST00000470463	ILVBL	A1L0T0	632 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	SMIM23	A6NLE4	172 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	RASA4B	C9J798	803 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	RASA4	O43374	803 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	C8A	P07357	584 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	HMBS	P08397	361 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	POU2F2	P09086	479 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
SND1-208	ENST00000470463	MBL2	P11226	248 aa	Predicted RBP	11.21	□□□□□ -0.61
SND1-208	ENST00000470463	CES1	P23141	567 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	SSTR1	P30872	391 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	CORO1A	P31146	461 aa	Known RBP	11.21	□□□□□ -0.61
SND1-208	ENST00000470463	MDH1	P40925	334 aa	Known RBP	11.21	□□□□□ -0.61
SND1-208	ENST00000470463	SLCO1A2	P46721	670 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	SERPINB9	P50453	376 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	GPX6	P59796	221 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	CDH17	Q12864	832 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	ZBTB17	Q13105	803 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	ZNF177	Q13360	481 aa	Predicted RBP	11.21	□□□□□ -0.61
SND1-208	ENST00000470463	LAMB3	Q13751	1172 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	SLC14A2	Q15849	920 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	SPANXN3	Q5MJ09	141 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	PPM1L	Q5SGD2	360 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	STEAP4	Q687X5	459 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	KCTD11	Q693B1	232 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	C14orf80	Q86SX3	495 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	SLC26A11	Q86WA9	606 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	LRRC6	Q86X45	466 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	LGI2	Q8N0V4	545 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	SH2D3C	Q8N5H7	860 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	TEX26	Q8N6G2	289 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	DNAAF3	Q8N9W5	541 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	11.21	□□□□□ -0.61
SND1-208	ENST00000470463	FBF1	Q8TES7	1133 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	MTBP	Q96DY7	904 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	AGAP3	Q96P47	875 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	XPO6	Q96QU8	1125 aa	Known RBP	11.21	□□□□□ -0.61
SND1-208	ENST00000470463	DHRS4	Q9BTZ2	278 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	CASS4	Q9NQ75	786 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	ASAH2	Q9NR71	780 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	EURL	Q9NYK6	297 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	SMG5	Q9UPR3	1016 aa	Known RBP	11.21	□□□□□ -0.61
SND1-208	ENST00000470463	MAD1L1	Q9Y6D9	718 aa		11.21	□□□□□ -0.61
SND1-208	ENST00000470463	TRAV19	A0A0A6YYK7	116 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	CXorf51A	A0A1B0GTR3	108 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	TCRBV9S1A1T	A0A576	114 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	C2orf71	A6NGG8	1288 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	POC1B-GALNT4	F8VUJ3	575 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	XYLB	O75191	536 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	KRT37	O76014	449 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	KRT38	O76015	456 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	KRT15	P19012	456 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	HDC	P19113	662 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	NFKB1	P19838	968 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	KCNQ1	P51787	676 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	SLC7A9	P82251	487 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	SMAD3	P84022	425 aa	Known RBP	11.2	□□□□□ -0.62
SND1-208	ENST00000470463	DNAJC3	Q13217	504 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	SERINC3	Q13530	473 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	GLIPR1L2	Q4G1C9	344 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	ARHGAP15	Q53QZ3	475 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	MPP7	Q5T2T1	576 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	ARTN	Q5T4W7	220 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	NADSYN1	Q6IA69	706 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	CASC4	Q6P4E1	433 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	POTEH	Q6S545	545 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	ZNF534	Q76KX8	674 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	ZNF354C	Q86Y25	554 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	DENND1C	Q8IV53	801 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	CCDC33	Q8N5R6	958 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	ZNF557	Q8N988	423 aa	Predicted RBP	11.2	□□□□□ -0.62
SND1-208	ENST00000470463	POF1B	Q8WVV4	589 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	SLC44A1	Q8WWI5	657 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	AUTS2	Q8WXX7	1259 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	IGSF8	Q969P0	613 aa		11.2	□□□□□ -0.62
SND1-208	ENST00000470463	SMC6	Q96SB8	1091 aa		11.2	□□□□□ -0.62

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