RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 KNOP1Q1ED39 458 aaKnown RBP12.36□□□□□ -0.43
LSM2-209ENST00000470083 ZNF394Q53GI3 561 aa12.36□□□□□ -0.43
LSM2-209ENST00000470083 ARHGAP17Q68EM7 881 aa12.36□□□□□ -0.43
LSM2-209ENST00000470083 HIST2H2BCQ6DN03 193 aa12.36□□□□□ -0.43
LSM2-209ENST00000470083 Q6ZSR6 202 aa12.36□□□□□ -0.43
LSM2-209ENST00000470083 RAB11FIP2Q7L804 512 aa12.36□□□□□ -0.43
LSM2-209ENST00000470083 PTAR1Q7Z6K3 402 aaPredicted RBP12.36□□□□□ -0.43
LSM2-209ENST00000470083 VASH2Q86V25 355 aa12.36□□□□□ -0.43
LSM2-209ENST00000470083 HORMAD1Q86X24 394 aa12.36□□□□□ -0.43
LSM2-209ENST00000470083 APCDD1Q8J025 514 aa12.36□□□□□ -0.43
LSM2-209ENST00000470083 PDILTQ8N807 584 aa12.36□□□□□ -0.43
LSM2-209ENST00000470083 TMC2Q8TDI7 906 aa12.36□□□□□ -0.43
LSM2-209ENST00000470083 KLK6Q92876 244 aa12.36□□□□□ -0.43
LSM2-209ENST00000470083 LRRC4Q9HBW1 653 aa12.36□□□□□ -0.43
LSM2-209ENST00000470083 DMAC2Q9NW81 257 aa12.36□□□□□ -0.43
LSM2-209ENST00000470083 ANAPC2Q9UJX6 822 aa12.36□□□□□ -0.43
LSM2-209ENST00000470083 TMX2-CTNND1H3BSU7 103 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 TULP2O00295 520 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 NTN3O00634 580 aaPredicted RBP12.35□□□□□ -0.43
LSM2-209ENST00000470083 XPO1O14980 1071 aaKnown RBP12.35□□□□□ -0.43
LSM2-209ENST00000470083 ALOX15BO15296 676 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 AQP9O43315 295 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 WT1P19544 449 aaPredicted RBP12.35□□□□□ -0.43
LSM2-209ENST00000470083 RPIAP49247 311 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 AMPD3Q01432 767 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 ADIGQ0VDE8 80 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 NCAPHQ15003 741 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 DEFB133Q30KQ1 61 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 MS4A13Q5J8X5 152 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 PIP5KL1Q5T9C9 394 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 B3GNT8Q7Z7M8 397 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 PARGQ86W56 976 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 SLC9A9Q8IVB4 645 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 TMEM174Q8WUU8 243 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 IL12RB2Q99665 862 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 CCDC3Q9BQI4 270 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 BOCQ9BWV1 1114 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 SRRTQ9BXP5 876 aaKnown RBP12.35□□□□□ -0.43
LSM2-209ENST00000470083 STRADBQ9C0K7 418 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 NUCKS1Q9H1E3 243 aaKnown RBP12.35□□□□□ -0.43
LSM2-209ENST00000470083 TUBD1Q9UJT1 453 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 KIF26BQ2KJY2 2108 aa12.35□□□□□ -0.43
LSM2-209ENST00000470083 SPENQ96T58 3664 aaKnown RBP12.34□□□□□ -0.43
LSM2-209ENST00000470083 SPTY2D1-AS1A0A0U1RR47 76 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 MCF2LO15068 1137 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 VASPP50552 380 aaPredicted RBP12.34□□□□□ -0.43
LSM2-209ENST00000470083 TBX4P57082 545 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 SULT2A1Q06520 285 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 KCNAB2Q13303 367 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 E2F4Q16254 413 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 DCAF6Q58WW2 860 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 C1orf220Q5T0J3 134 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 OR6B2Q6IFH4 312 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 BORAQ6PGQ7 559 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 KYAT3Q6YP21 454 aaKnown RBP12.34□□□□□ -0.43
LSM2-209ENST00000470083 SLC35F3Q8IY50 421 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 SIX6OS1Q8N1H7 587 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 CFAP52Q8N1V2 620 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 SCML4Q8N228 414 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 TTC39CQ8N584 583 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 SLC4A11Q8NBS3 891 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 GLMNQ92990 594 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 CUEDC2Q9H467 287 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 SYNDIG1Q9H7V2 258 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 EPB41L5Q9HCM4 733 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 CNGB3Q9NQW8 809 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 PLEKHB1Q9UF11 243 aaPredicted RBP12.34□□□□□ -0.43
LSM2-209ENST00000470083 KLF15Q9UIH9 416 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 HS3ST3A1Q9Y663 406 aa12.34□□□□□ -0.43
LSM2-209ENST00000470083 MORC2Q9Y6X9 1032 aaPredicted RBP12.34□□□□□ -0.43
LSM2-209ENST00000470083 ATP9BO43861 1147 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 JMJD7P0C870 316 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 HGFP14210 728 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 JUNDP17535 347 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 RAD23BP54727 409 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 POLE2P56282 527 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 CCDC15Q0P6D6 951 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 SLC12A1Q13621 1099 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 UNC13DQ70J99 1090 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 DTX1Q86Y01 620 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 PIP4P2Q8N4L2 257 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 LMX1AQ8TE12 382 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 TAS1R2Q8TE23 839 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 TATDN2Q93075 761 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 FCRL2Q96LA5 508 aaPredicted RBP12.33□□□□□ -0.44
LSM2-209ENST00000470083 BMFQ96LC9 184 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 C7orf25Q9BPX7 421 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 SLC39A2Q9NP94 309 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 PISDQ9UG56 409 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 ZFR2Q9UPR6 939 aaKnown RBP12.33□□□□□ -0.44
LSM2-209ENST00000470083 PCDHB11Q9Y5F2 797 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 CENPEQ02224 2701 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 RP1P56715 2156 aa12.33□□□□□ -0.44
LSM2-209ENST00000470083 FBN2P35556 2912 aa12.32□□□□□ -0.44
LSM2-209ENST00000470083 POM121BA6NF01 834 aa12.32□□□□□ -0.44
LSM2-209ENST00000470083 D6RAR5 112 aa12.32□□□□□ -0.44
LSM2-209ENST00000470083 KRT38O76015 456 aa12.32□□□□□ -0.44
LSM2-209ENST00000470083 ZNF18P17022 549 aa12.32□□□□□ -0.44
LSM2-209ENST00000470083 CCKBRP32239 447 aa12.32□□□□□ -0.44
LSM2-209ENST00000470083 RABIFP47224 123 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms