RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 TKTL1P51854 596 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 EPHB1P54762 984 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 TBL3Q12788 808 aaKnown RBP13.92□□□□□ -0.18
BRCA1-209ENST00000470026 DLG2Q15700 870 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 SFT2D3Q587I9 215 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 HSP90AA5PQ58FG0 334 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 RAB41Q5JT25 222 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 SLC30A9Q6PML9 568 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 KCNMB4Q86W47 210 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 VPS39Q96JC1 886 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 MAML3Q96JK9 1138 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 AGAP3Q96P47 875 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 TUBGCP5Q96RT8 1024 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 KCNK16Q96T55 309 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 IL22Q9GZX6 179 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 DRC3Q9H069 523 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 ABHD16BQ9H3Z7 469 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 EBF3Q9H4W6 596 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 ZNF385DQ9H6B1 395 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 PAPOLBQ9NRJ5 636 aaKnown RBP13.92□□□□□ -0.18
BRCA1-209ENST00000470026 PIN4Q9Y237 131 aaKnown RBP13.92□□□□□ -0.18
BRCA1-209ENST00000470026 SLC45A1Q9Y2W3 748 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 SRCAPQ6ZRS2 3230 aa13.92□□□□□ -0.18
BRCA1-209ENST00000470026 SYNJ2BP-COX16A0A087WUM0 186 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 EME2A4GXA9 379 aaPredicted RBP13.91□□□□□ -0.18
BRCA1-209ENST00000470026 AP3B1O00203 1094 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 RNASEH1O60930 286 aaKnown RBP13.91□□□□□ -0.18
BRCA1-209ENST00000470026 LTFP02788 710 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 UBTFL6P0CB48 400 aaPredicted RBP13.91□□□□□ -0.18
BRCA1-209ENST00000470026 GNAT1P11488 350 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 ADSLP30566 484 aaPredicted RBP13.91□□□□□ -0.18
BRCA1-209ENST00000470026 PAPOLAP51003 745 aaKnown RBP13.91□□□□□ -0.18
BRCA1-209ENST00000470026 TPI1P60174 286 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 ZBTB17Q13105 803 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 CUL3Q13618 768 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 TTLL12Q14166 644 aaPredicted RBP13.91□□□□□ -0.18
BRCA1-209ENST00000470026 SMAD1Q15797 465 aaKnown RBP13.91□□□□□ -0.18
BRCA1-209ENST00000470026 C11orf91Q3C1V1 193 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 CERCAMQ5T4B2 595 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 ITPRIPL1Q6GPH6 555 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 ZYG11AQ6WRX3 759 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 HPS6Q86YV9 775 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 CPSF7Q8N684 471 aaKnown RBP13.91□□□□□ -0.18
BRCA1-209ENST00000470026 TDRD5Q8NAT2 981 aaKnown RBP13.91□□□□□ -0.18
BRCA1-209ENST00000470026 ARRDC4Q8NCT1 418 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 SMG8Q8ND04 991 aaKnown RBP13.91□□□□□ -0.18
BRCA1-209ENST00000470026 ACVR1CQ8NER5 493 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 SLC26A7Q8TE54 656 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 SREK1Q8WXA9 508 aaKnown RBP13.91□□□□□ -0.18
BRCA1-209ENST00000470026 KIFC1Q9BW19 673 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 PPP1R12CQ9BZL4 782 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 ULBP1Q9BZM6 244 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 KLHL4Q9C0H6 718 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 CNGB3Q9NQW8 809 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 COX16Q9P0S2 106 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 VPS28Q9UK41 221 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 PRPF19Q9UMS4 504 aaKnown RBP13.91□□□□□ -0.18
BRCA1-209ENST00000470026 SSX2IPQ9Y2D8 614 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 RAP2CQ9Y3L5 183 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 CABYRO75952 493 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 UQCRBP14927 111 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 ROR2Q01974 943 aaKnown RBP13.91□□□□□ -0.18
BRCA1-209ENST00000470026 ZNF33AQ06730 810 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 GRM2Q14416 872 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 GRB14Q14449 540 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 THEMIS2Q5TEJ8 643 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 WSCD1Q658N2 575 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 BHLHA9Q7RTU4 235 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 MFN1Q8IWA4 741 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 DNAAF3Q8N9W5 541 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 TEKT5Q96M29 485 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 OR52B2Q96RD2 323 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 ILKAPQ9H0C8 392 aaPredicted RBP13.91□□□□□ -0.18
BRCA1-209ENST00000470026 CAB39LQ9H9S4 337 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 CRTAC1Q9NQ79 661 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 TCF7L2Q9NQB0 619 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 NSMCE4AQ9NXX6 385 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 RRN3Q9NYV6 651 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 IPPQ9Y573 584 aa13.91□□□□□ -0.18
BRCA1-209ENST00000470026 LOC100653049A0A140TA62 436 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.9□□□□□ -0.18
BRCA1-209ENST00000470026 E2F8A0AVK6 867 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 YJEFN3A6XGL0 299 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 TARM1B6A8C7 271 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 E9PBE3 544 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 PTGESO14684 152 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 KLHL41O60662 606 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 KRT34O76011 436 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 FAM200BP0CF97 657 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 THRAP10827 490 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 NFKB1P19838 968 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 MAP3K7CLP57077 242 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 ITGA7Q13683 1181 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 ANO4Q32M45 955 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 LIPMQ5VYY2 423 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 CWF19L1Q69YN2 538 aaKnown RBP13.9□□□□□ -0.18
BRCA1-209ENST00000470026 ZC3HC1Q86WB0 502 aaKnown RBP13.9□□□□□ -0.18
BRCA1-209ENST00000470026 ZMIZ2Q8NF64 920 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 ATXN7L3BQ96GX2 97 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 TSGA13Q96PP4 275 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms