RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 METRNLQ641Q3 311 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 SLC27A1Q6PCB7 646 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 FAM228AQ86W67 206 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 GSPT2Q8IYD1 628 aaKnown RBP6.73□□□□□ -1.33
PTCD3-208ENST00000469585 THNSL1Q8IYQ7 743 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 SYCP3Q8IZU3 236 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 SH2D3CQ8N5H7 860 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 PDILTQ8N807 584 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 C4orf32Q8N8J7 132 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 SYT2Q8N9I0 419 aaPredicted RBP6.73□□□□□ -1.33
PTCD3-208ENST00000469585 LINC00301Q8NCQ3 95 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 FAM156AQ8NDB6 213 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 OR10H5Q8NGA6 315 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 RAD54LQ92698 747 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 ZBTB10Q96DT7 871 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 NT5C1BQ96P26 610 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 CTAGE1Q96RT6 745 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 USP28Q96RU2 1077 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 ADOQ96SZ5 270 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 MNTQ99583 582 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 CCDC94Q9BW85 323 aaPredicted RBP6.73□□□□□ -1.33
PTCD3-208ENST00000469585 TMEM117Q9H0C3 514 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 MRPL46Q9H2W6 279 aaKnown RBP6.73□□□□□ -1.33
PTCD3-208ENST00000469585 ERVK-5Q9HDB9 667 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 AGPAT5Q9NUQ2 364 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 SEL1LQ9UBV2 794 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 TCAF1Q9Y4C2 921 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 A0A0U1RQF3 1178 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 KRTAP23-1A1A580 65 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 CAPN8A6NHC0 703 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 PRSS29PA6NIE9 313 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 PP2D1A8MPX8 630 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 HNRNPDLO14979 420 aaKnown RBP6.72□□□□□ -1.33
PTCD3-208ENST00000469585 NCK2O43639 380 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 EDIL3O43854 480 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 MYL1P05976 194 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 GLRA2P23416 452 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 SLC6A2P23975 617 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 MGAT1P26572 445 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 ARL2P36404 184 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 ASIC1P78348 528 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 DEFB103AP81534 67 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 CAPSQ13938 189 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 FGL2Q14314 439 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 AAK1Q2M2I8 961 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 SPECC1Q5M775 1068 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 ATF7IP2Q5U623 682 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 RINT1Q6NUQ1 792 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 ZNF585AQ6P3V2 769 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.72□□□□□ -1.33
PTCD3-208ENST00000469585 PPP1R3BQ86XI6 285 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 ECHDC2Q86YB7 292 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 LINC01465Q8N7H1 131 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 NLGN4YQ8NFZ3 816 aaPredicted RBP6.72□□□□□ -1.33
PTCD3-208ENST00000469585 DHX58Q96C10 678 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 C8orf49Q96NF6 230 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 ZNF558Q96NG5 402 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 SARGQ9BW04 601 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 C1orf43Q9BWL3 253 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 GPR87Q9BY21 358 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 TNMDQ9H2S6 317 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 DEF6Q9H4E7 631 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 GSTO2Q9H4Y5 243 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 MRPL44Q9H9J2 332 aaKnown RBP6.72□□□□□ -1.33
PTCD3-208ENST00000469585 RSAD1Q9HA92 442 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 ARNT2Q9HBZ2 717 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 SLC38A7Q9NVC3 462 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 CHMP5Q9NZZ3 219 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 WRAP73Q9P2S5 460 aaPredicted RBP6.72□□□□□ -1.33
PTCD3-208ENST00000469585 FBXO2Q9UK22 296 aaPredicted RBP6.72□□□□□ -1.33
PTCD3-208ENST00000469585 MTUS1Q9ULD2 1270 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 FAM50BQ9Y247 325 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 SSX2IPQ9Y2D8 614 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 PCDHB2Q9Y5E7 798 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 EVPLQ92817 2033 aa6.72□□□□□ -1.33
PTCD3-208ENST00000469585 ARID1BQ8NFD5 2236 aaPredicted RBP6.72□□□□□ -1.33
PTCD3-208ENST00000469585 BRCA2P51587 3418 aa6.71□□□□□ -1.33
PTCD3-208ENST00000469585 GRXCR1A8MXD5 290 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 GOLGA6L6A8MZA4 724 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 ACKR2O00590 384 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 SLC16A4O15374 487 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 POLR2DO15514 142 aaKnown RBP6.71□□□□□ -1.34
PTCD3-208ENST00000469585 CLDN3O15551 220 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 ZC3H11AO75152 810 aaKnown RBP eCLIP6.71□□□□□ -1.34
PTCD3-208ENST00000469585 HAUS5O94927 633 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 SMC2O95347 1197 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 GCNT3O95395 438 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 MATN4O95460 622 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 FGFR4P22455 802 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 SYKP43405 635 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 NPTX2P47972 431 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 PIK3CGP48736 1102 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 MAN2A2P49641 1150 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 DRP2Q13474 957 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 POSTNQ15063 836 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 CNN3Q15417 329 aaKnown RBP6.71□□□□□ -1.34
PTCD3-208ENST00000469585 FAM187BQ17R55 369 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 TMEM119Q4V9L6 283 aa6.71□□□□□ -1.34
PTCD3-208ENST00000469585 HERC4Q5GLZ8 1057 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms