RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 GDPD5Q8WTR4 605 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 NT5C3BQ969T7 300 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 TNIP3Q96KP6 325 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 ZNF560Q96MR9 790 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 KLHL4Q9C0H6 718 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 DNAI2Q9GZS0 605 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 VCX3BQ9H321 246 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 PIGVQ9NUD9 493 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 CHCHD3Q9NX63 227 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 STAP1Q9ULZ2 295 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 ZCWPW2A0A1B0GU75 182 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 FAM72CH0Y354 149 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 COQ9O75208 318 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 BEST1O76090 585 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 AP2A1O95782 977 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 MPOP05164 745 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 PRDX6P30041 224 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 MFSD10Q14728 455 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 ANKRD20A4Q4UJ75 823 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 FAM72AQ5TYM5 149 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 FAM72DQ6L9T8 149 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 TMEM135Q86UB9 458 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 FAM72BQ86X60 149 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 B3GALNT2Q8NCR0 500 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 TMEM40Q8WWA1 233 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 WNT8BQ93098 351 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 DUSP16Q9BY84 665 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 LRRC4Q9HBW1 653 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 ZDHHC7Q9NXF8 308 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 NRCAMQ92823 1304 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 ATP9BO43861 1147 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 HUS1O60921 280 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 ERCC2P18074 760 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 TAF6P49848 677 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 OSTM1Q86WC4 334 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 TDRD5Q8NAT2 981 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 URGCPQ8TCY9 931 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 SREK1Q8WXA9 508 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 MFSD3Q96ES6 412 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 ZNF638Q14966 1978 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 RALGAPA2Q2PPJ7 1873 aa16.1■□□□□ 0.17
TSPAN4-211ENST00000468468 TMEM114B3SHH9 223 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 TREHO43280 583 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 TRIM13O60858 407 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 C2P06681 752 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 RAG1P15918 1043 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 PEX2P28328 305 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 ZNF157P51786 506 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 CERCAMQ5T4B2 595 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 HFE2Q6ZVN8 426 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 ACAD11Q709F0 780 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 BNIPLQ7Z465 357 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 FAM81AQ8TBF8 368 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 HNRNPABQ99729 332 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 TRIM4Q9C037 500 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 UBE2OQ9C0C9 1292 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 OCEL1Q9H607 264 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 NMRAL1Q9HBL8 299 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 ZBTB24O43167 697 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 LTFP02788 710 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 ACAT1P24752 427 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 AQP4P55087 323 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 MSLNQ13421 630 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 PDZD4Q76G19 769 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 CLEC14AQ86T13 490 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 SIX6OS1Q8N1H7 587 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 RNF169Q8NCN4 708 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 ADAM32Q8TC27 787 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 OR52B2Q96RD2 323 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 RTKNQ9BST9 563 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 NMRK2Q9NPI5 230 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 CASS4Q9NQ75 786 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 GOLGA8QA0A0J9YX86 632 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 GOLGA8OA6NCC3 632 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 GOLGA8NF8WBI6 632 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 MYL3P08590 195 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 DARSP14868 501 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 UQCRBP14927 111 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 ADRA1BP35368 520 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 PNPLA4P41247 253 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 MTTPP55157 894 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 SOX4Q06945 474 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 MPP3Q13368 585 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 MED21Q13503 144 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 TRIP10Q15642 601 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 C1QTNF12Q5T7M4 302 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 RASAL3Q86YV0 1011 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 ACVR1CQ8NER5 493 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 SLC7A14Q8TBB6 771 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 MOCOSQ96EN8 888 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 LENG8Q96PV6 779 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 KCNK16Q96T55 309 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 APOL2Q9BQE5 337 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 GATA5Q9BWX5 397 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 RNF39Q9H2S5 420 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 TCF7L2Q9NQB0 619 aa16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 C20orf96Q9NUD7 363 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-211ENST00000468468 SMIM35A0A1B0GVV1 85 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms