RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 HOXD12P35452 270 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 PRKCIP41743 596 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 MAMLD1Q13495 774 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 FIGNQ5HY92 759 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 ACBD5Q5T8D3 534 aaPredicted RBP11.83□□□□□ -0.52
CDHR3-205ENST00000468143 DAB2IPQ5VWQ8 1189 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.83□□□□□ -0.52
CDHR3-205ENST00000468143 SH2D3CQ8N5H7 860 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 AADATQ8N5Z0 425 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 DNASE2BQ8WZ79 361 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 BIRC7Q96CA5 298 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.83□□□□□ -0.52
CDHR3-205ENST00000468143 C2orf49Q9BVC5 232 aaPredicted RBP11.83□□□□□ -0.52
CDHR3-205ENST00000468143 OSBPL2Q9H1P3 480 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 SGK2Q9HBY8 427 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 CAPN10Q9HC96 672 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 ATP13A1Q9HD20 1204 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 MYO1AQ9UBC5 1043 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 PPARGC1AQ9UBK2 798 aaKnown RBP11.83□□□□□ -0.52
CDHR3-205ENST00000468143 ZNF212Q9UDV6 495 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 SARDHQ9UL12 918 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 CFAP54Q96N23 3096 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 A0A1B0GTW7 788 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 ILVBLA1L0T0 632 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 ARHGAP33O14559 1287 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 CREB3O43889 395 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 RTN2O75298 545 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 C5AR1P21730 350 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 PSMA2P25787 234 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 ACVRL1P37023 503 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 GALCP54803 685 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 GNA12Q03113 381 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 ELAVL3Q14576 367 aaKnown RBP11.82□□□□□ -0.52
CDHR3-205ENST00000468143 TDRD12Q587J7 1177 aaKnown RBP11.82□□□□□ -0.52
CDHR3-205ENST00000468143 MANEALQ5VSG8 457 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 PLEKHA7Q6IQ23 1121 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 NCEH1Q6PIU2 408 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 LEKR1Q6ZMV7 388 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 USP30Q70CQ3 517 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 TMC6Q7Z403 805 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 RABEPKQ7Z6M1 372 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 DCAF4L2Q8NA75 395 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 OR14C36Q8NHC7 312 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 OR8D1Q8WZ84 308 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 TBC1D31Q96DN5 1066 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 VCPIP1Q96JH7 1222 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 CNPY3Q9BT09 278 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 TRIM7Q9C029 511 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 XPO4Q9C0E2 1151 aaKnown RBP11.82□□□□□ -0.52
CDHR3-205ENST00000468143 TNKS2Q9H2K2 1166 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 PARVAQ9NVD7 372 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 GPATCH2LQ9NWQ4 482 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 CNOT8Q9UFF9 292 aaKnown RBP11.82□□□□□ -0.52
CDHR3-205ENST00000468143 SUSD2Q9UGT4 822 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 FZD10Q9ULW2 581 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 SCML1Q9UN30 329 aa11.82□□□□□ -0.52
CDHR3-205ENST00000468143 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.82□□□□□ -0.52
CDHR3-205ENST00000468143 ZNF292O60281 2723 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 RALGAPA1Q6GYQ0 2036 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 A0A1W2PQJ5 194 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 RNF103O00237 685 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 GIPC1O14908 333 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 MCF2LO15068 1137 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 BCAT2O15382 392 aaPredicted RBP11.81□□□□□ -0.52
CDHR3-205ENST00000468143 ZMPSTE24O75844 475 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 KCNK5O95279 499 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 ADH1BP00325 375 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 SYPP08247 313 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 RHOQP17081 205 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 GOT1P17174 413 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 CSNK1EP49674 416 aaKnown RBP11.81□□□□□ -0.52
CDHR3-205ENST00000468143 VASPP50552 380 aaPredicted RBP11.81□□□□□ -0.52
CDHR3-205ENST00000468143 DNA2P51530 1060 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 ARF5P84085 180 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 ZBED6P86452 979 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 NRG1Q02297 640 aaPredicted RBP11.81□□□□□ -0.52
CDHR3-205ENST00000468143 SFSWAPQ12872 951 aaKnown RBP11.81□□□□□ -0.52
CDHR3-205ENST00000468143 NFKBIBQ15653 356 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 EFHC2Q5JST6 749 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 HGSNATQ68CP4 663 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 KIAA0895LQ68EN5 471 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 LAYNQ6UX15 382 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 NLRP14Q86W24 1093 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 MINDY1Q8N5J2 469 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 ARFGAP1Q8N6T3 406 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 CHST14Q8NCH0 376 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 RNF214Q8ND24 703 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 OR2A12Q8NGT7 310 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 PIP4K2CQ8TBX8 421 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 NTAN1Q96AB6 310 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 ZNF653Q96CK0 615 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 TSPY26PQ9H489 355 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 TMEM248Q9NWD8 314 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 PCSK1NQ9UHG2 260 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 ADAMTS1Q9UHI8 967 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 PPM1HQ9ULR3 514 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 CAPN11Q9UMQ6 739 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 NEU3Q9UQ49 428 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 HS3ST2Q9Y278 367 aa11.81□□□□□ -0.52
CDHR3-205ENST00000468143 FCF1Q9Y324 198 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms